Panzer
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#include <Panzer_STK_ModelEvaluatorFactory.hpp>
Public Member Functions | |
void | buildObjects (const Teuchos::RCP< const Teuchos::Comm< int > > &comm, const Teuchos::RCP< panzer::GlobalData > &global_data, const Teuchos::RCP< const panzer::EquationSetFactory > &eqset_factory, const panzer::BCStrategyFactory &bc_factory, const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &cm_factory, bool meConstructionOn=true) |
Builds the model evaluators for a panzer assembly. More... | |
Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > | getPhysicsModelEvaluator () |
void | setUserWorksetFactory (Teuchos::RCP< panzer_stk::WorksetFactory > &user_wkst_factory) |
Set user defined workset factory. More... | |
Teuchos::RCP< panzer::ResponseLibrary< panzer::Traits > > | getResponseLibrary () |
const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > & | getPhysicsBlocks () const |
Teuchos::RCP< panzer_stk::STK_Interface > | getMesh () const |
Get mesh object used to build model evaluator. More... | |
Teuchos::RCP< panzer::UniqueGlobalIndexerBase > | getGlobalIndexer () const |
Get global indexer used to build model evaluator. More... | |
Teuchos::RCP< panzer::ConnManagerBase< int > > | getConnManager () const |
Get connection manager. More... | |
bool | isBlockedAssembly () const |
Is blocked assembly? More... | |
Teuchos::RCP< panzer::LinearObjFactory< panzer::Traits > > | getLinearObjFactory () const |
Get linear object factory used to build model evaluator. More... | |
bool | isTransient () const |
Teuchos::RCP< Thyra::ModelEvaluator< double > > | cloneWithNewPhysicsBlocks (const Teuchos::RCP< Thyra::LinearOpWithSolveFactoryBase< ScalarT > > &solverFactory, const Teuchos::RCP< Teuchos::ParameterList > &physics_block_plist, const Teuchos::RCP< const panzer::EquationSetFactory > &eqset_factory, const panzer::BCStrategyFactory &bc_factory, const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &user_cm_factory, bool is_transient, bool is_explicit, const Teuchos::Ptr< const Teuchos::ParameterList > &bc_list=Teuchos::null, const Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > &physics_me=Teuchos::null) const |
void | setupInitialConditions (Thyra::ModelEvaluator< ScalarT > &model, panzer::WorksetContainer &wkstContainer, const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > &physicsBlocks, const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &cm_factory, const panzer::LinearObjFactory< panzer::Traits > &lof, const Teuchos::ParameterList &initial_cond_pl, const Teuchos::ParameterList &user_data_pl, bool write_dot_files, const std::string &dot_file_prefix) const |
Setup the initial conditions in a model evaluator. Note that this is entirely self contained. More... | |
void | writeInitialConditions (const Thyra::ModelEvaluator< ScalarT > &model, const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > &physicsBlocks, const Teuchos::RCP< panzer::WorksetContainer > &wc, const Teuchos::RCP< const panzer::UniqueGlobalIndexerBase > &ugi, const Teuchos::RCP< const panzer::LinearObjFactory< panzer::Traits > > &lof, const Teuchos::RCP< panzer_stk::STK_Interface > &mesh, const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &cm_factory, const Teuchos::ParameterList &closure_model_pl, const Teuchos::ParameterList &user_data_pl, int workset_size) const |
Write the initial conditions to exodus. Note that this is entirely self contained. More... | |
Teuchos::RCP< Thyra::ModelEvaluatorDefaultBase< double > > | buildPhysicsModelEvaluator (bool buildThyraME, const Teuchos::RCP< panzer::FieldManagerBuilder > &fmb, const Teuchos::RCP< panzer::ResponseLibrary< panzer::Traits > > &rLibrary, const Teuchos::RCP< panzer::LinearObjFactory< panzer::Traits > > &lof, const std::vector< Teuchos::RCP< Teuchos::Array< std::string > > > &p_names, const std::vector< Teuchos::RCP< Teuchos::Array< double > > > &p_values, const Teuchos::RCP< Thyra::LinearOpWithSolveFactoryBase< ScalarT > > &solverFactory, const Teuchos::RCP< panzer::GlobalData > &global_data, bool is_transient, double t_init) const |
bool | useDynamicCoordinates () const |
double | getInitialTime (Teuchos::ParameterList &transient_ic_params, const panzer_stk::STK_Interface &mesh) const |
Gets the initial time from either the input parameter list or an exodus file. More... | |
Teuchos::RCP< Thyra::LinearOpWithSolveFactoryBase< double > > | buildLOWSFactory (bool blockedAssembly, const Teuchos::RCP< const panzer::UniqueGlobalIndexerBase > &globalIndexer, const Teuchos::RCP< panzer::ConnManagerBase< int > > &conn_manager, const Teuchos::RCP< panzer_stk::STK_Interface > &mesh, const Teuchos::RCP< const Teuchos::MpiComm< int > > &mpi_comm) const |
Teuchos::RCP< panzer::WorksetContainer > | getWorksetContainer () const |
Get the workset container associated with the mesh database. More... | |
void | addUserFieldsToMesh (panzer_stk::STK_Interface &mesh, const Teuchos::ParameterList &output_list) const |
Add the user fields specified by output_list to the mesh. More... | |
Teuchos::RCP< STK_MeshFactory > | buildSTKMeshFactory (const Teuchos::ParameterList &mesh_params) const |
build STK mesh factory from a mesh parameter list More... | |
void | finalizeMeshConstruction (const STK_MeshFactory &mesh_factory, const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > &physicsBlocks, const Teuchos::MpiComm< int > mpi_comm, STK_Interface &mesh) const |
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RCP< ParameterList > | getNonconstParameterList () |
RCP< ParameterList > | unsetParameterList () |
RCP< const ParameterList > | getParameterList () const |
RCP< ParameterList > | getNonconstParameterList () |
RCP< ParameterList > | unsetParameterList () |
RCP< const ParameterList > | getParameterList () const |
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virtual | ~ParameterListAcceptor () |
virtual RCP< const DependencySheet > | getDependencies () const |
virtual RCP< const DependencySheet > | getDependencies () const |
Overridden from ParameterListAcceptor | |
void | setParameterList (Teuchos::RCP< Teuchos::ParameterList > const ¶mList) |
Teuchos::RCP< const Teuchos::ParameterList > | getValidParameters () const |
Methods for building the solver | |
void | setNOXObserverFactory (const Teuchos::RCP< const panzer_stk::NOXObserverFactory > &nox_observer_factory) |
void | setRythmosObserverFactory (const Teuchos::RCP< const panzer_stk::RythmosObserverFactory > &rythmos_observer_factory) |
template<typename BuilderT > | |
int | addResponse (const std::string &responseName, const std::vector< panzer::WorksetDescriptor > &wkstDesc, const BuilderT &builder) |
void | buildResponses (const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > &cm_factory, const bool write_graphviz_file=false, const std::string &graphviz_file_prefix="") |
Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > | getResponseOnlyModelEvaluator () |
Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > | buildResponseOnlyModelEvaluator (const Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > &thyra_me, const Teuchos::RCP< panzer::GlobalData > &global_data, const Teuchos::RCP< Piro::RythmosSolver< ScalarT > > rythmosSolver=Teuchos::null, const Teuchos::Ptr< const panzer_stk::NOXObserverFactory > &in_nox_observer_factory=Teuchos::null, const Teuchos::Ptr< const panzer_stk::RythmosObserverFactory > &in_rythmos_observer_factory=Teuchos::null) |
Definition at line 107 of file Panzer_STK_ModelEvaluatorFactory.hpp.
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Implements Teuchos::ParameterListAcceptor.
Definition at line 117 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
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Reimplemented from Teuchos::ParameterListAcceptor.
Definition at line 133 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
void panzer_stk::ModelEvaluatorFactory< ScalarT >::buildObjects | ( | const Teuchos::RCP< const Teuchos::Comm< int > > & | comm, |
const Teuchos::RCP< panzer::GlobalData > & | global_data, | ||
const Teuchos::RCP< const panzer::EquationSetFactory > & | eqset_factory, | ||
const panzer::BCStrategyFactory & | bc_factory, | ||
const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > & | cm_factory, | ||
bool | meConstructionOn = true |
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Builds the model evaluators for a panzer assembly.
[in] | comm | (Required) Teuchos communicator. Must be non-null. |
[in] | global_data | (Required) A fully constructed (all members allocated) global data object used to control parameter library and output support. Must be non-null. |
[in] | eqset_factory | (Required) Equation set factory to provide user defined equation sets. |
[in] | bc_factory | (Required) Boundary condition factory to provide user defined boundary conditions. |
[in] | cm_factory | (Required) Closure model factory to provide user defined closure models. |
Definition at line 246 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > panzer_stk::ModelEvaluatorFactory< ScalarT >::getPhysicsModelEvaluator | ( | ) |
Definition at line 1089 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
void panzer_stk::ModelEvaluatorFactory< ScalarT >::setNOXObserverFactory | ( | const Teuchos::RCP< const panzer_stk::NOXObserverFactory > & | nox_observer_factory | ) |
Definition at line 1097 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
void panzer_stk::ModelEvaluatorFactory< ScalarT >::setRythmosObserverFactory | ( | const Teuchos::RCP< const panzer_stk::RythmosObserverFactory > & | rythmos_observer_factory | ) |
Definition at line 1103 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
int panzer_stk::ModelEvaluatorFactory< ScalarT >::addResponse | ( | const std::string & | responseName, |
const std::vector< panzer::WorksetDescriptor > & | wkstDesc, | ||
const BuilderT & | builder | ||
) |
Definition at line 341 of file Panzer_STK_ModelEvaluatorFactory.hpp.
void panzer_stk::ModelEvaluatorFactory< ScalarT >::buildResponses | ( | const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > & | cm_factory, |
const bool | write_graphviz_file = false , |
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const std::string & | graphviz_file_prefix = "" |
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Definition at line 1546 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > panzer_stk::ModelEvaluatorFactory< ScalarT >::getResponseOnlyModelEvaluator | ( | ) |
Definition at line 1115 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > panzer_stk::ModelEvaluatorFactory< ScalarT >::buildResponseOnlyModelEvaluator | ( | const Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > & | thyra_me, |
const Teuchos::RCP< panzer::GlobalData > & | global_data, | ||
const Teuchos::RCP< Piro::RythmosSolver< ScalarT > > | rythmosSolver = Teuchos::null , |
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const Teuchos::Ptr< const panzer_stk::NOXObserverFactory > & | in_nox_observer_factory = Teuchos::null , |
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const Teuchos::Ptr< const panzer_stk::RythmosObserverFactory > & | in_rythmos_observer_factory = Teuchos::null |
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Definition at line 1125 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
void panzer_stk::ModelEvaluatorFactory< ScalarT >::setUserWorksetFactory | ( | Teuchos::RCP< panzer_stk::WorksetFactory > & | user_wkst_factory | ) |
Set user defined workset factory.
Definition at line 1109 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
Teuchos::RCP< panzer::ResponseLibrary< panzer::Traits > > panzer_stk::ModelEvaluatorFactory< ScalarT >::getResponseLibrary | ( | ) |
Definition at line 1220 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > & panzer_stk::ModelEvaluatorFactory< ScalarT >::getPhysicsBlocks | ( | ) | const |
Definition at line 1229 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
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Get mesh object used to build model evaluator.
Definition at line 167 of file Panzer_STK_ModelEvaluatorFactory.hpp.
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Get global indexer used to build model evaluator.
Definition at line 171 of file Panzer_STK_ModelEvaluatorFactory.hpp.
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Get connection manager.
Definition at line 175 of file Panzer_STK_ModelEvaluatorFactory.hpp.
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Is blocked assembly?
Definition at line 179 of file Panzer_STK_ModelEvaluatorFactory.hpp.
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Get linear object factory used to build model evaluator.
Definition at line 183 of file Panzer_STK_ModelEvaluatorFactory.hpp.
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Definition at line 186 of file Panzer_STK_ModelEvaluatorFactory.hpp.
Teuchos::RCP< Thyra::ModelEvaluator< double > > panzer_stk::ModelEvaluatorFactory< ScalarT >::cloneWithNewPhysicsBlocks | ( | const Teuchos::RCP< Thyra::LinearOpWithSolveFactoryBase< ScalarT > > & | solverFactory, |
const Teuchos::RCP< Teuchos::ParameterList > & | physics_block_plist, | ||
const Teuchos::RCP< const panzer::EquationSetFactory > & | eqset_factory, | ||
const panzer::BCStrategyFactory & | bc_factory, | ||
const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > & | user_cm_factory, | ||
bool | is_transient, | ||
bool | is_explicit, | ||
const Teuchos::Ptr< const Teuchos::ParameterList > & | bc_list = Teuchos::null , |
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const Teuchos::RCP< Thyra::ModelEvaluator< ScalarT > > & | physics_me = Teuchos::null |
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) | const |
Clone the internal model evaluator, but use new physics blocks. Note that the physics blocks must be in some sense compatible with the original set.
Definition at line 1274 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
void panzer_stk::ModelEvaluatorFactory< ScalarT >::setupInitialConditions | ( | Thyra::ModelEvaluator< ScalarT > & | model, |
panzer::WorksetContainer & | wkstContainer, | ||
const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > & | physicsBlocks, | ||
const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > & | cm_factory, | ||
const panzer::LinearObjFactory< panzer::Traits > & | lof, | ||
const Teuchos::ParameterList & | initial_cond_pl, | ||
const Teuchos::ParameterList & | user_data_pl, | ||
bool | write_dot_files, | ||
const std::string & | dot_file_prefix | ||
) | const |
Setup the initial conditions in a model evaluator. Note that this is entirely self contained.
Definition at line 827 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
void panzer_stk::ModelEvaluatorFactory< ScalarT >::writeInitialConditions | ( | const Thyra::ModelEvaluator< ScalarT > & | model, |
const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > & | physicsBlocks, | ||
const Teuchos::RCP< panzer::WorksetContainer > & | wc, | ||
const Teuchos::RCP< const panzer::UniqueGlobalIndexerBase > & | ugi, | ||
const Teuchos::RCP< const panzer::LinearObjFactory< panzer::Traits > > & | lof, | ||
const Teuchos::RCP< panzer_stk::STK_Interface > & | mesh, | ||
const panzer::ClosureModelFactory_TemplateManager< panzer::Traits > & | cm_factory, | ||
const Teuchos::ParameterList & | closure_model_pl, | ||
const Teuchos::ParameterList & | user_data_pl, | ||
int | workset_size | ||
) | const |
Write the initial conditions to exodus. Note that this is entirely self contained.
Definition at line 883 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
Teuchos::RCP< Thyra::ModelEvaluatorDefaultBase< double > > panzer_stk::ModelEvaluatorFactory< ScalarT >::buildPhysicsModelEvaluator | ( | bool | buildThyraME, |
const Teuchos::RCP< panzer::FieldManagerBuilder > & | fmb, | ||
const Teuchos::RCP< panzer::ResponseLibrary< panzer::Traits > > & | rLibrary, | ||
const Teuchos::RCP< panzer::LinearObjFactory< panzer::Traits > > & | lof, | ||
const std::vector< Teuchos::RCP< Teuchos::Array< std::string > > > & | p_names, | ||
const std::vector< Teuchos::RCP< Teuchos::Array< double > > > & | p_values, | ||
const Teuchos::RCP< Thyra::LinearOpWithSolveFactoryBase< ScalarT > > & | solverFactory, | ||
const Teuchos::RCP< panzer::GlobalData > & | global_data, | ||
bool | is_transient, | ||
double | t_init | ||
) | const |
This method is to assist with construction of the model evaluators.
Definition at line 1409 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
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Definition at line 242 of file Panzer_STK_ModelEvaluatorFactory.hpp.
double panzer_stk::ModelEvaluatorFactory< ScalarT >::getInitialTime | ( | Teuchos::ParameterList & | transient_ic_params, |
const panzer_stk::STK_Interface & | mesh | ||
) | const |
Gets the initial time from either the input parameter list or an exodus file.
[in] | transient_ic_params | ParameterList that determines where to get the initial time value. |
[in] | mesh | STK Mesh database used if the time value should come from the exodus file |
Definition at line 1440 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
Teuchos::RCP< Thyra::LinearOpWithSolveFactoryBase< double > > panzer_stk::ModelEvaluatorFactory< ScalarT >::buildLOWSFactory | ( | bool | blockedAssembly, |
const Teuchos::RCP< const panzer::UniqueGlobalIndexerBase > & | globalIndexer, | ||
const Teuchos::RCP< panzer::ConnManagerBase< int > > & | conn_manager, | ||
const Teuchos::RCP< panzer_stk::STK_Interface > & | mesh, | ||
const Teuchos::RCP< const Teuchos::MpiComm< int > > & | mpi_comm | ||
) | const |
Definition at line 1506 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
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Get the workset container associated with the mesh database.
Definition at line 265 of file Panzer_STK_ModelEvaluatorFactory.hpp.
void panzer_stk::ModelEvaluatorFactory< ScalarT >::addUserFieldsToMesh | ( | panzer_stk::STK_Interface & | mesh, |
const Teuchos::ParameterList & | output_list | ||
) | const |
Add the user fields specified by output_list to the mesh.
Definition at line 743 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
Teuchos::RCP< panzer_stk::STK_MeshFactory > panzer_stk::ModelEvaluatorFactory< ScalarT >::buildSTKMeshFactory | ( | const Teuchos::ParameterList & | mesh_params | ) | const |
build STK mesh factory from a mesh parameter list
build STK mesh from a mesh parameter list
Definition at line 929 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
void panzer_stk::ModelEvaluatorFactory< ScalarT >::finalizeMeshConstruction | ( | const STK_MeshFactory & | mesh_factory, |
const std::vector< Teuchos::RCP< panzer::PhysicsBlock > > & | physicsBlocks, | ||
const Teuchos::MpiComm< int > | mpi_comm, | ||
STK_Interface & | mesh | ||
) | const |
Definition at line 1017 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
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Definition at line 1240 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
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Definition at line 1474 of file Panzer_STK_ModelEvaluatorFactory_impl.hpp.
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Definition at line 335 of file Panzer_STK_ModelEvaluatorFactory.hpp.