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| Name: python311-astropy | Distribution: openSUSE:Factory:zSystems |
| Version: 6.0.0 | Vendor: openSUSE |
| Release: 1.1 | Build date: Mon Dec 11 22:00:21 2023 |
| Group: Unspecified | Build host: s390zl23 |
| Size: 49378030 | Source RPM: python-astropy-6.0.0-1.1.src.rpm |
| Packager: https://bugs.opensuse.org | |
| Url: https://astropy.org | |
| Summary: Community-developed python astronomy tools | |
Astropy is a package intended to contain core functionality and some common tools needed for performing astronomy and astrophysics research with Python. It also provides an index for other astronomy packages and tools for managing them.
BSD-3-Clause
* Sat Dec 09 2023 Ben Greiner <code@bnavigator.de>
- Update to 6.0.0
[#]# New Features
[#]## astropy.config
* The new ConfigNamespace.help() method provides a convenient way
to get information about configuration items. [#13499]
[#]## astropy.coordinates
* Support has been added to create geodetic representations not
just for existing ellipsoids from ERFA, but also with
explicitly provided values, by defining a subclass of
BaseGeodeticRepresentation with the equatorial radius and
flattening assigned to _equatorial_radius and _flattening
attributes. [#14763]
* Add BaseBodycentricRepresentation, a new spheroidal
representation for bodycentric latitudes and longitudes.
[#14851]
* Support Numpy broadcasting over frame data and attributes.
[#15121]
[#]## astropy.cosmology
* Registered a latex writer for exporting a Cosmology object to a
LaTex table. [#14701]
* Added argument rename to Cosmology’s I/O, allowing for input
and output symbols to be renamed. [#14780]
* All non-abstract Cosmology subclasses are now automatically
registered to work with Astropy’s YAML serialization. [#14979]
* Cosmology I/O now auto-identifies the ‘.tex’ suffix with the
‘ascii.latex’ format. [#15088]
* The Cosmology class now has a new property to access the
parameters of the cosmology: .parameters. This property return
a read-only dictionary of all the non-derived parameter values
on the cosmology object. When accessed from the class (not an
instance) the dictionary contains Parameter instances, not the
values. [#15168]
* The field default has been added to Parameter. This can be used
to introspect the default value of a parameter on a cosmology
class e.g. LambdaCDM.H0.default. [#15400]
[#]## astropy.io.fits
* Add new option decompress_in_memory to fits.open, to decompress
the whole file in memory at once, instead of decompressing the
file progressively as data is needed. Default behavior is
better for memory usage but sometimes slow, especially for
files with many small HDUs. [#15501]
[#]## astropy.io.votable
* Add support for Parquet serialization of VOTables. Writing of
this serialization is available with using the new
'votable.parquet' format. [#15281]
* Added MIVOT feature through the MivotBlock class that allows
model annotations reading and writing in VOTable. [#15390]
[#]## astropy.modeling
* Added a GeneralSersic2D model that can have “boxy” or “disky”
isophotes. [#15545]
[#]## astropy.nddata
* A more flexible and/or compact string representation is now
available for NDData objects which visually indicates masked
entries, and provides for better for dask array support.
[#14438]
[#]## astropy.table
* The new Row.get() method, analogous to dict.get(), returns the
value of the specified column from the row if the column
present, otherwise it returns a fallback value, which by
default is None. [#14878]
[#]## astropy.time
* Masked Time instances now use astropy’s own Masked class
internally. This means that Masked input is now properly
recognized, and that masks get propagated also to Quantity
output (such as from a TimeDelta converted to a unit of time),
creating MaskedQuantity instances. [#15231]
* Added a TimeDelta format quantity_str that represents the time
delta as a string with one or more Quantity components. This
format provides a human-readable multi-scale string
representation of a time delta. The default output sub-format
is not considered stable in this release, please see
astropy/astropy#15485 for more information. [#15264]
[#]## astropy.uncertainty
* Uncertainty Distribution now support structured data types, and
as a result it now works also with EarthLocation. [#15304]
* Uncertainty Distribution can now be used inside
representations, which also allows basic support in SkyCoord.
While most calculations work, there are remaining issues. For
instance, the repr does not show that the coordinates are
distributions. [#15395]
[#]## astropy.units
* Add support for gc2gde and gd2gce erfa functions to allow
geodetic representations using equatorial radius and
flattening. [#14729]
[#]## astropy.utils
* The astropy.utils.metadata.MetaData default dictionary can now
be set with the default_factory keyword argument. [#15265]
* astropy.utils.decorators.deprecated now adds the __deprecated__
attribute to the objects it wraps, following the practice in
https://peps.python.org/pep-0702/. [#15310]
[#]## astropy.visualization
* Add WCSAxes.text_coord method to print text using SkyCoord
objects parallel to plotting data points with
WCSAxes.plot_coord. [#14661]
[#]## astropy.wcs
* Support WCS descriptions of basic planetary coordinate frames.
[#14820]
* Updated bundled WCSLIB version to 8.1. This update adds support
planetary keywords A_RADIUS, B_RADIUS, C_RADIUS, BLON_OBS,
BLAT_OBS, and BDIS_OBS in auxprm and adds wcsprm::time to the
wcsprm struct to record the TIME axis. This update also
includes several bug fixes. For a full list of changes - see
http://www.atnf.csiro.au/people/mcalabre/WCS/CHANGES [#15035]
[#]# API Changes
[#]## astropy.config
* Removed deprecated ConfigurationMissingWarning class and
update_default_config function; There are no replacements as
they should no be used anymore. [#15466]
[#]## astropy.convolution
* Invalid kernel arithmetic operations now raise a
KernelArithmeticError instead of a bare Exception. [#14728]
* Added base KernelError error class and removed
DiscretizationError error class (a ValueError will be raised
instead). [#14732]
* discretize_model will now raise a ValueError if
mode='oversample' and factor does not have an integer value.
[#14794]
[#]## astropy.coordinates
* Removed deprecated angle parsing and formatting utilities from
angle_utilities. Use the functions from angle_formats instead.
[#14675]
* The deprecated functionality of initializing Angle or Longitude
from a tuple is no longer supported. [#15205]
* Angle-related classes and functions have been moved within
astropy.coordinates. There is no change to public API as
everything moved should still be imported from
astropy.coordinates, not a sub-module. If you are using private
API, try importing from astropy.coordinates instead. If you
need something that has been moved and is not available in
astropy.coordinates, please open an issue on the Astropy issue
tracker. [#15220]
* It is no longer possible to pass frame classes to the
transform_to() method of a low-level coordinate-frame class. It
is still possible to pass frame instances. The transform_to()
method of the high-level SkyCoord class is unaffected. [#15500]
[#]## astropy.cosmology
* Removed support of importing private constants and functions
from astropy.cosmology.flrw. [#14672]
* Removed deprecated Cosmology Parameter argument fmt. [#14673]
* Removed deprecated vectorize_if_needed and inf_like from
cosmology.utils. [#14677]
* Removed deprecated import paths from astropy.cosmology.core.
[#14782]
* Cosmology Parameter is now a dataclass, and can work with all
of Python’s dataclasses machinery, like field introspection and
type conversion. [#14874]
* A new property – scale_factor0 – has been added to Cosmology
objects. This is the scale factor at redshift 0, and is defined
to be 1.0. [#14931]
* Added registration label ascii.latex to Cosmology IO. [#14938]
* The private module astropy.cosmology.utils has been deprecated.
[#14980]
* Removed deprecated get_cosmology_from_string class method in
default_cosmology; use get instead. [#15467]
[#]## astropy.io.ascii
* Several arguments in functions within astropy.io.ascii have
been deprecated and are either renamed or scheduled to be
removed.
* read(): - Reader will be removed. Instead supply the equivalent
format argument. - Inputter has been renamed to inputter_cls. -
Outputter has been renamed to outputter_cls.
* get_reader(): - Reader has been renamed to reader_cls. -
Inputter has been renamed to inputter_cls. - Outputter has been
renamed to outputter_cls.
* write(): - Writer will be removed. Instead supply the
equivalent format argument.
* get_writer(): - Writer has been renamed to writer_cls. [#14914]
* Removed deprecated astropy.io.ascii.tests.common.raises test
helper; use pytest.raises instead. [#15470]
[#]## astropy.io.fits
* Deprecate _ExtensionHDU and _NonstandardExtHDU (use
ExtensionHDU or NonstandardExtHDU instead). [#15396]
* Remove special handling of TCTYP TCUNI TCRPX TCRVL TCDLT TRPOS
(#7157). [#15396]
* Rename and deprecate TableHDU.update to TableHDU.update_header,
for consistency with ImageHDU. [#15396]
[#]## astropy.io.misc
* Removed deprecated astropy.io.misc.asdf subpackage. Use
asdf-astropy package instead. [#14668]
* fnunpickle and fnpickle are deprecated because they are not
used anywhere within astropy. If you must, use the module from
Python standard library but be advised that pickle is insecure
so you should only unpickle data that you trust. [#15418]
[#]## astropy.io.votable
* Removed deprecated pedantic option from the
astropy.io.votable.table.parse() function and the corresponding
configuration setting. Use the verify option instead. [#14669]
* Class astropy.io.votable.tree.Table has been renamed to
TableElement to avoid sharing the name with
astropy.table.Table. [#15372]
* Fully removed support for version = ‘1.0’ on
VOTableFile__init__() and changed its tests to check correctly.
It was raising a DeprecationWarning and now is raising a
ValueError. [#15490]
[#]## astropy.modeling
* Removed the AliasDict class from modeling.utils. [#12943]
* Creating a model instance with parameters that have
incompatible shapes will now raise a ValueError rather than an
IncompatibleShapeError. [#15209]
* Removal of deprecated code _model_to_fit_params and
_fitter_to_model_params from fitting.py. [#15461]
[#]## astropy.stats
* The BoxLeastSquares, BoxLeastSquaresResults and LombScargle
classes are not available from astropy.stats anymore, they are
now available only from astropy.timeseries. [#15530]
[#]## astropy.tests
* Removed deprecated deprecation, warning, and exception handling
functionality provided by astropy.tests.helper. [#14670]
* astropy.tests.command.FixRemoteDataOption and
astropy.tests.command.AstropyTest are deprecated. They are no
longer necessary after sunsetting astropy-helpers. [#15204]
[#]## astropy.time
* Time has switched to use Masked arrays internally, instead of
indicating masked values using NaN in the internal jd2
attribute. As a result, any output from instances, such as one
gets with, say, the .isot format, will also use Masked by
default.
* For backwards compatibility, a new configuration item,
astropy.time.conf.masked_array_type is introduced which is set
to “astropy” by default (which indicates one wants to use
Masked), but can also be set to “numpy”, in which case
numpy.ma.MaskedArray will be used where possible (essentially,
for all but Quantity). [#15231]
* Changed the TimeDelta init signature to be consistent with that
of Time. Previously the argument order was val, val2, format,
scale, copy. Now the order is val, val2, format, scale, *,
precision, in_subfmt, out_subfmt, copy, where the arguments
after the * must be specified by keyword. [#15264]
[#]## astropy.timeseries
* Removed deprecated midpoint_epoch in fold function; use
epoch_time instead. [#15462]
[#]## astropy.uncertainty
* The .dtype attribute exposed by Distribution is now that of the
samples, rather than one that has a “samples” entry. This makes
quantities with structured data types and units easier to
support, and generally makes the Distribution appear more
similar to regular arrays. It should have little effect on
code. For instance, distribution["samples"] still will return
the actual distribution.
* As a consequence of this refactoring, most arrays that are not
C-contiguous can now be viewed and will thus not be copied on
input any more. The only exceptions are arrays for which the
strides are negative.
* Note that the true data type is considered an implementation
detail. But for reference, it now is a structured data type
with a single field, “samples”, which itself is an array of
“sample” fields, which contain the actual data. [#15304]
[#]## astropy.units
* Like np.ndarray, under numpy 2.0 Quantity and all its
subclasses (Angle, Masked, etc.) will no longer support the
.ptp() method. Use np.ptp(...) instead.
* Similarly, support for the much less frequently used
.newbyteorder() and .itemset() methods has been removed.
[#15378]
* The following deprecated functionality has been removed:
- littleh unit and with_H0 equivalency. They are still
available from cosmology.units.
- brightness_temperature equivalency no longer automatically
swaps the order of its arguments if it does not match the
expectation.
- PhysicalType no longer supports str methods and attributes.
[#15514]
[#]## astropy.utils
* Removed deprecated OrderedDescriptor,
OrderedDescriptorContainer, and set_locale in
astropy.utils.misc. [#14679]
* is_path_hidden() and walk_skip_hidden() are deprecated.
[#14759]
* The structure of utils.metadata has been refactored, but all
the available functions and classes are still present and
should be imported as before. [#15166]
* The astropy.utils.metadata.MetaData class, which is used
throughout astropy to carry metadata on tables, columns, etc.,
can now also be used on dataclasses.
* When accessing the meta attribute on a class
astropy.utils.metadata.MetaData now returns None instead of
itself. [#15237]
* The astropy.utils.metadata.MetaData class, which is used
throughout astropy to carry metadata on tables, columns, etc.,
can now also be used on frozen dataclasses. [#15404]
* Removed deprecated version_path in minversion function; it is
no longer used. [#15468]
[#]## astropy.visualization
* The bboxes, ticklabels_bbox, and tick_out_size arguments to
astropy.visualization.wcaxes.ticklabels.TickLabels.draw() now
have no effect and are deprecated. This is to allow rasterized
ticks to be drawn correctly on WCSAxes. [#14760]
* It is now not possible to pass any keyword arguments to
astropy.visualization.wcsaxes.WCSAxes.draw(). Previously
passing any keyword arguments would have errored anyway, as
matplotlib.axes.Axes.draw() does not accept keyword arguments.
[#14772]
* Deprecated the exp attribute in the LogStretch,
InvertedLogStretch, PowerDistStretch, and
InvertedPowerDistStretch stretch classes, and the power
attribute in the PowerStretch. Instead, use the a attribute,
which matches the input keyword. [#15538]
* Removed the maximum value of the a parameter in the
AsinhStretch and SinhStretch stretch classes. [#15539]
[#]## astropy.wcs
* Removed deprecated accuracy from all_world2pix method in WCS;
use tolerance instead. [#15464]
* NoConvergence no longer accepts arbitrary keyword arguments.
[#15504]
[#]# Bug Fixes
[#]## astropy.coordinates
* Fixed minor bug when getting solar system positions of objects
from Type 3 SPICE kernel files. [#15612]
[#]## astropy.cosmology
* The exponent in w0wzCDM.de_density_scale has been corrected to
3, from -3. This correction has also been made to the scalar
inv_efunc cpython functions. [#14991]
* pandas.Series are now uniformly converted to their underlying
data type when given as an argument to a Cosmology method.
[#15600]
[#]## astropy.io.fits
* Reading a table from FITS now respects the TNULL property of a
column, passing it into the column’s fill_value. [#14723]
* Fix crash when a PrimaryHDU has a GROUPS keyword with a
non-boolean value (i.e. not a random-groups HDU). [#14998]
* Fixed a bug that caused Cutout2D to not work correctly with
CompImageHDU.section [#14999]
* Fixed a bug that caused compressed images with TFORM missing
the optional ‘1’ prefix to not be readable. [#15001]
* Ensure that tables written to FITS with both masked and
unmasked columns roundtrip properly (previously, all integer
columns would become masked if any column was masked). [#15473]
* Fix segfault with error report in tile decompression. [#15489]
[#]## astropy.io.votable
* Output of repr for VOTable instance now clearly shows it is a
VOTable and not generic astropy Table. [#14702]
[#]## astropy.modeling
* All models can be pickled now. [#14902]
[#]## astropy.nddata
* Restore bitmask propagation behavior in NDData.mask, plus a fix
for arithmetic between masked and unmasked NDData objects.
[#14995]
[#]## astropy.table
* Table.as_array now respects the fill_value property of masked
columns. [#14723]
* Fix a bug where table indexes were not using a stable sort
order. This was causing the order of rows within groups to not
match the original table order when an indexed table was
grouped. [#14907]
* Fixed issue #14964 that when grouping a Table on a mixin column
such as Quantity or Time, the grouped table keys did not
reflect the original column values. For Quantity this meant
that the key values were pure float values without the unit,
while for Time the key values were the pair of jd1 and jd2
float values. [#14966]
[#]## astropy.time
* Ensure that the Time caches of formats and scales do not get
out of sync with the actual data, even if another instance,
holding a view of the data is written to. E.g., if one does t01
= t[:2], and sets t[0] after, it is now guaranteed that
t01.value will correctly reflect that change in value. [#15453]
[#]## astropy.units
* In VOunits, “pix”, “au”, “a”, and “ct” are removed from the
list of deprecated units. [#14885]
[#]## astropy.utils
* Ufuncs with more than 2 operands (such as erfa.dtf2d) now work
also if all inputs are scalars and more than two inputs have
masks. [#15450]
* Ensured that str(masked_array) looks like str(unmasked_array)
also for array scalars. Thus, like regular array scalars, the
precision is ignored for float, and strings do not include
extra quoting. [#15451]
[#]## astropy.visualization
* The location of ticklabels on a WCSAxes is now correctly
calculated when the figure is rasterized. [#14760]
* Fixed a bug where a ValueError would be raised in the
AsinhStretch and SinhStretch classes for valid a parameter
values. [#15539]
[#]## astropy.wcs
* wcs.validate(filename) now properly closes the file handler.
[#15054]
* Fix a regression in custom WCS mapping due to the recent
introduction of Solar System frames. [#15630]
[#]# Other Changes and Additions
* The minimum supported version of NumPy is now 1.22. [#15006]
* Moved International Earth Rotation and Reference Systems (IERS)
and Leap Second files out into standalone astropy-iers-data
package, maintaining full backward-compatibility in the
astropy.utils.iers API. Deprecation warnings may be issued when
certain files are accessed directly. [#14819]
* Switch from using setup.cfg for project configuration to using
pyproject.toml. [#15247]
* Update bundled expat to 2.5.0. [#15585]
- Drop astropy-pr15479-pvstar.patch
* Wed Nov 08 2023 Ben Greiner <code@bnavigator.de>
- Add astropy-pr15479-pvstar.patch
* PR gh#astropy/astropy#15479 backports gh#astropy/astropy#15476
* Issue at gh#astropy/astropy#15537
* Fri Oct 06 2023 Ben Greiner <code@bnavigator.de>
- Update to 5.3.4
[#]# Bug Fixes
[#]## astropy.io.misc
* Updated ``astropy.io.misc.yaml`` so ``dump()` with a numpy
object array or ``load()`` with YAML representing a Numpy
object array both raise ``TypeError``. This prevents problems
like a segmentation fault. [#15373]
[#]## astropy.io.votable
* Fixed a bug in ``convert_to_writable_filelike`` where
``GzipFile`` was not closed properly. [#15359]
[#]## astropy.units
* In VOUnit, the spaces around the slash were removed in the
formatting of fractions, and fractional powers now also use the
"**" operator. [#15282]
* We now ensure that the unit ``u.cgs.cm`` is just an alias of
``u.si.cm``, instead of a redefinition. This ensures that
``u.Unit("cm") / u.cm`` will reliably cancel to dimensionless
(instead of some "cm / cm"). [#15368]
[#]## astropy.utils
* For ``Masked``, ``np.ptp`` and the ``.ptp()`` method now
properly account for the mask, ensuring the result is identical
to subtracting the maximum and minimum (with the same
arguments). [#15380]
[#]# Other Changes and Additions
* Compatibility with Python 3.12. [#14784]
* Replaced the URL of ``IETF_LEAP_SECOND_URL`` because the
original is now defunct and IETF now defers to IANA for such
look-up. [#15421]
* Thu Sep 14 2023 Ben Greiner <code@bnavigator.de>
- Update to 5.3.3
[#]# Bug Fixes
[#]## astropy.coordinates
* TransformGraph.to_dot_graph() now throws an exception for
invalid savelayout.
[#]## astropy.cosmology
* The exponent of w0wzCDM functions in inv_efunc has been
corrected to 3, from -3. [#15224]
[#]## astropy.modeling
* Astropy modeling can filter non-finite data values using the
filter_non_finite keyword argument in a fitter call. Now when
filter_non_finite is True, non-finite weights will also be
filtered to prevent crashes in LevMarLSQFitter. [#15215]
[#]## astropy.units
* Fixed astropy.units.Quantity’s implementation of
numpy.nanmedian(), where for Numpy >= 1.25 an exception was
raised for some array shapes and axis combinations. [#15228]
[#]# Other Changes and Additions
* v5.3.x will not support NumPy 2.0 or later. [#15234]
- Restrain to Cython < 3 -- gh#astropy/astropy#15315
* Tue Aug 22 2023 Ben Greiner <code@bnavigator.de>
- Update to 5.3.2
[#]## astropy.coordinates
* Fixed import when called with Python -OO flag. [#15037]
[#]## astropy.nddata
* Fix for collapse operations on NDData without masks or units.
[#15082]
[#]## astropy.units
* Modified the implementation of np.power() for instances of
Quantity to allow any array as the second operand if all its
elements have the same value. [#15101]
* Sun Jul 16 2023 Dirk Müller <dmueller@suse.com>
- update to 5.3.1:
* The exponent in ``wowzCDM.de_density_scale`` has been
corrected to 3, from -3.
* Fix crash when a PrimaryHDU has a GROUPS keyword with a non-
boolean value (i.e. not a random-groups HDU).
* Fixed a bug that caused ``Cutout2D`` to not work correctly
with ``CompImageHDU.section``
* Fixed a bug that caused compressed images with TFORM missing
the optional '1' prefix to not be readable. [#15001]
* Restore bitmask propagation behavior in ``NDData.mask``, plus
a fix for arithmetic between masked and unmasked ``NDData``
objects.
* Fix a bug where table indexes were not using a stable sort
order. This was causing the order of rows within groups to
not match the original table order when an indexed table
was grouped. [#14907]
* In VOunits, "pix", "au", "a", and "ct" are removed from the
list of deprecated units. [#14885]
* Sat Jul 01 2023 Ben Greiner <code@bnavigator.de>
- Update to 5.3
* New flat astropy.cosmology classes
* New union operators for Table
* Efficient data access for compressed FITS files
* Added support for NOCOMPRESS for compressed FITS files
* New fraction option for representing units as strings
* Change in order in unit string representations
* Support for collapse operations on arbitrary axes in nddata
* Refresh cached observatory site registry for EarthLocation
methods
* Support for collapse operations on arbitrary axes in nddata
* New LombScargleMultiband class for multiband datasets
- Remove unbundling of cfitsio -- gh#astropy/astropy#14311
* Wed Apr 26 2023 Ben Greiner <code@bnavigator.de>
- Update to 5.2.2
[#]# Bug Fixes
[#]## astropy.io.ascii
* CDS and MRT tables with units that contain with multiple
divisions, such as km/s/Mpc now parse correctly as being equal
to km/(s.Mpc). [#14369]
[#]## astropy.io.fits
* Fix FITSDiff when table contains a VLA column with the Q type.
[#14539]
[#]## astropy.table
* Fix a bug when creating a QTable when a Quantity input column
is present and the units argument modifies the unit of that
column. This now works as expected where previously this caused
an exception. [#14357]
[#]## astropy.units
* CDS units with multiple divisions, such as km/s/Mpc now parse
correctly as being equal to km/(s.Mpc). [#14369]
[#]## astropy.wcs
* Fixed a bug that caused subclasses of BaseHighLevelWCS and
HighLevelWCSMixin to not work correctly under certain
conditions if they did not have world_n_dim and pixel_n_dim
defined on them. [#14495]
* Sun Feb 19 2023 Ben Greiner <code@bnavigator.de>
- Don't test with skyfield on python311: gh#brandon-rhodes/assay#15
* Fri Jan 13 2023 Ben Greiner <code@bnavigator.de>
- Update to 5.2.1
[#]# Bug Fixes
[#]## astropy.coordinates
* Fix to ITRS frame earth_location attribute to give the correct
result for a topocentric frame. [#14180]
[#]## astropy.cosmology
* Bounds are no longer passed to the scipy minimizer for methods
Brent and Golden. The scipy minimizer never used the bounds but
silently accepted them. In scipy v1.11.0.dev0+ an error is
raised, so we now pass None as the bounds to the minimizer.
Users should not be affected by this change. [#14232]
[#]## astropy.io.fits
* Tables with multidimensional variable length array can now be
properly read and written. [#13417]
[#]## astropy.units
* Modified the behavior of numpy.histogram(),
numpy.histogram_bin_edges(), numpy.histogram2d(), and
numpy.histogramdd() so that the range argument must a
compatible instance of astropy.units.Quantity if the other
arguments are instances of astropy.units.Quantity. [#14213]
[#]## astropy.visualization
* Improved the performance of drawing WCSAxes grids by skipping
some unnecessary computations. [#14164]
* Fixed WCSAxes sometimes triggering a NumPy RuntimeWarning when
determining the coordinate range of the axes. [#14211]
[#]# Other Changes and Additions
* Fix compatibility with Numpy 1.24. [#14193]
- Drop astropy-pr14194-numpy1.24.patch
* Wed Dec 21 2022 Ben Greiner <code@bnavigator.de>
- Update to 5.2
* Astropy 5.2 is a major release that adds significant new
functionality since the 5.1 release.
* In particular, this release includes:
* Quantity data types
* Updates to astropy.cosmology
* Topocentric ITRS Frame
* Enhanced Fixed Width ASCII Tables
* Accessing cloud-hosted FITS files
* Drawing the instrument beam and a physical scale bar on
celestial images
* Interior ticks and tick labels
* Support for tilde-prefixed paths
* CCDData PSF Image representation
* In addition to these major changes, Astropy 5.2 includes a
large number of smaller improvements and bug fixes.
- Move to PEP517 build
- Revert rpmlintrc: the whitelist error category has been removed
from rpmlint
- Add astropy-pr14194-numpy1.24.patch gh#astropy/astropy#14194
* Mon Nov 21 2022 Ben Greiner <code@bnavigator.de>
- Whitelist stupid rpmlint error
* https://docs.astropy.org/en/latest/development/testguide.html#astropy-test
* gh#rpm-software-management/rpmlint#965
* Sun Oct 23 2022 Ben Greiner <code@bnavigator.de>
- Update to 5.1.1
[#] API Changes
[#]# astropy.wcs
* The pixel argument to
astropy.visualization.wcsaxes.ticklabels.TickLabels.add no
longer does anything, is deprecated, and will be removed in a
future astropy version. It has been replaced by a new required
data argument, which should be used to specify the data
coordinates of the tick label being added.
* This changes has been made because it is (in general) not
possible to correctly calculate pixel coordinates before
Matplotlib is drawing a figure. [#12630]
[#] Bug Fixes
[#]# astropy.coordinates
* Fixed a bug that prevented SkyOffsetFrame instances to be
pickled by adding a custom __reduce__ method to the class (see
issue #9249). [#13305]
* Fixed the check for invalid Latitude values for float32 values.
Latitude now accepts the float32 value of pi/2, which was
rejected before because a comparison was made using the
slightly smaller float64 representation. See issue #13708.
[#13745]
[#]# astropy.io.ascii
* Fixed confusing chained exception messages of read() function
when it fails. [#13170]
* When writing out a :class:`~astropy.table.Table` to HTML
format, the formats keyword argument to the
:meth:`~astropy.table.Table.write` method will now be applied.
[#13453]
[#]# astropy.io.fits
* heapsize is now checked for VLA tables. An error is thrown
whether P format is used but the heap size is bigger than what
can be indexed with a 32 bit signed int. [#13429]
* Fix parsing of ascii TFORM when precision is missing. [#13520]
* A compressed image HDU created from the header of a PRIMARY
HDU, now correctly updates 'XTENSION' and 'SIMPLE' keywords.
[#13557]
* Empty variable-length arrays are now properly handled when
pathological combinations of heapoffset and heapsize are
encountered. [#13621]
* PCOUNT and GCOUNT keywords are now removed from an uncompressed
Primary header, for compliancy with fitsverify behavior.
[#13753]
[#]# astropy.modeling
* Bugfix for using MagUnit units on model parameters. [#13158]
* Fix bug in using non-linear fitters to fit 0-degree polynomials
using weights. [#13628]
[#]# astropy.table
* Fix a problem where accessing one field of a structured column
returned a Column with the same info as the original column.
This resulted in unintuitive behavior in general and an
exception if the format for the column was set. [#13269]
* Tables with columns with structured data can now be properly
stacked and joined. [#13306]
* Update jQuery to 3.6.0, to pick up security fixes. [#13438]
* Fix a Python 3.11 compatibility issue. Ensure that when
removing a table column that the pprint_include_names or
pprint_exclude_names attributes get updated correctly. [#13639]
* When using add_columns with same indexes in indexes option or
without specifying the option, the order of the new columns
will now be kept. [#13783]
* Fix a bug when printing or getting the representation of a
multidimensional table column that has a zero dimension.
[#13838]
* Ensure that mixin columns and their info are not shared between
tables even when their underlying data is shared with
copy=False. [#13842]
[#]# astropy.time
* Fix Time.insert() on times which have their out_subfmt set.
[#12732]
* Prevent Time() from being initialized with an invalid precision
leading to incorrect results when representing the time as a
string. [#13068]
* Fix a bug in Time where a date string like "2022-08-01.123" was
being parsed as an ISO-format time "2022-08-01 00:00:00.123".
The fractional part at the end of the string was being taken as
seconds. Now this raises an exception because the string is not
in ISO format. [#13731]
[#]# astropy.units
* Significantly improved the performance of parsing composite
units with the FITS format, by ensuring the detailed_exception
argument is properly passed on and thus used. [#12699]
* Ensure that np.concatenate on quantities can take a dtype
argument (added in numpy 1.20). [#13323]
* Ensure that the units of any initial argument to reductions
such as np.add.reduce (which underlies np.sum) are properly
taken into account. [#13340]
[#]# astropy.utils
* Ensure that np.concatenate on masked data can take a dtype
argument (added in numpy 1.20). [#13323]
* Fix error when suppressing download progress bar while using
non-default sys.stdout stream. [#13352]
* Ensure str and repr work properly for Masked versions of
structured subarrays. [#13404]
* If an attribute is created using deprecated_attribute() with
the alternative argument then getting or setting the value of
the deprecated attribute now accesses its replacement. [#13824]
[#]# astropy.visualization
* Fixed calling .tight_layout() on a WCSAxes. [#12418]
[#]# astropy.wcs
* WCS.pixel_to_world now creates an EarthLocation object using
MJD-AVG if present before falling back to the old behaviour of
using MJD-OBS. [#12598]
* The locations of WCSAxes ticks and tick-labels are now
correctly calculated when the DPI of a figure changes between a
WCSAxes being created and the figure being drawn, or when a
rasterized artist is added to the WCSAxes. [#12630]
* Fix a bug where SlicedLowLevelWCS.world_to_pixel_values would
break when the result of the transform is dependent on the
coordinate of a sliced out pixel. [#13579]
* Updated bundled WCSLIB version to 7.12. This update includes
bug fixes to wcssub() in how it handles temporal axes with -TAB
and fixes handling of status returns from linp2x() and linx2p()
relating to distortion functions, in particular affecting TPV
distortions - see #13509. For a full list of changes - see
http://www.atnf.csiro.au/people/mcalabre/WCS/CHANGES or
astropy/cextern/wcslib/CHANGES. [#13635]
* Fixed WCS validation not working properly if HDUList is needed
for multi-extension FITS file. [#13668]
* Mon Jun 20 2022 Ben Greiner <code@bnavigator.de>
- Skip two tests because of hypothesis -- gh#astropy/astropy#13275
* Tue May 31 2022 Ben Greiner <code@bnavigator.de>
- Skip two test categories segfaulting: gh#astropy/astropy#13286
* Thu May 26 2022 Ben Greiner <code@bnavigator.de>
- Update to 5.1
* Astropy 5.1 is a major release that adds significant new
functionality since the 5.0 LTS release.
* In particular, this release includes:
- Updates to cosmology
- doppler_redshift() equivalency
- Specifying data types when reading ASCII tables
- Structured Columns
- New model fitters have been added
- Allow time conversions without predictive Earth rotation data
(IERS-A)
- Uncertainty classes can be transformed into each other
- Schechter1D Model
* In addition to these major changes, Astropy v5.1 includes a
large number of smaller improvements and bug fixes, which are
described in the Full Changelog.
* Sat Apr 23 2022 Ben Greiner <code@bnavigator.de>
- Enable tests requiring Pytest 7
* Fri Apr 01 2022 Ben Greiner <code@bnavigator.de>
- Update to 5.0.4
[#] Bug Fixes
[#]# astropy.modeling
* Fixed the Gaussian2D bounding_box when theta is an angular
Quantity. [#13021]
[#]# astropy.utils
* Reverted astropy.utils.iers.iers.IERS_A_URL to
maia.usno.navy.mil domain instead of NASA FTP to work around
server issues. [#13004]
[#] Other Changes and Additions
* Updated bundled WCSLIB to version 7.9 with several bugfixes and
added support for time coordinate axes in wcsset() and
wcssub(). The four-digit type code for the time axis will have
the first digit set to 4, i.e., four digit code will be 4xxx
where x is a digit 0-9. For a full list of bug fixes see
https://www.atnf.csiro.au/people/mcalabre/WCS/CHANGES [#12994]
(when building --without system_wcslib)
- Release 5.0.3
[#] Bug Fixes
[#]# astropy.convolution
* Bugfix in astropy.convolution.utils.discretize_model which
allows the function to handle a CompoundModel. Before this fix,
discretize_model was confusing CompoundModel with a callable
function. [#12959]
[#]# astropy.io.fits
* Fix write and read FITS tables with multidimensional items,
using from_columns without previousely defined ColDefs
structure. [#12863]
[#]# astropy.io.votable
* Fix VOTable linting to avoid use of shell option. [#12985]
astropy.utils
* Fix XML linting to avoid use of shell option. [#12985]
[#] Other Changes and Additions
* Updated the bundled CFITSIO library to 4.1.0. [#12967]
(when building --without system_cfitsio)
* Sun Mar 13 2022 Ben Greiner <code@bnavigator.de>
- Update to 5.0.2
astropy.io.ascii
* Bugfix to add backwards compatibility for reading ECSV version
0.9 files with non-standard column datatypes (such as `object`,
`str`, `datetime64`, etc.), which would raise a ValueError in
ECSV version 1.0. [#12880]
* astropy.io.misc
* Bugfix for `units_mapping` schema's property name conflicts.
Changes:
- `inputs` to `unit_inputs`
- `outputs` to `unit_outputs` [#12800]
astropy.io.votable
* Fixed a bug where `astropy.io.votable.validate` was printing
output to `sys.stdout` when the `output` paramter was set to
`None`. `validate` now returns a string when `output` is set to
`None`, as documented. [#12604]
astropy.modeling
* Fix handling of units on `scale` parameter in BlackBody model.
[#12318]
* Indexing on models can now be used with all types of integers
(like `numpy.int64`) instead of just `int`. [#12561]
* Fix computation of the separability of a `CompoundModel` where
another `CompoundModel` is on the right hand side of the `&`
operator. [#12907]
* Provide a hook (`Model._calculate_separability_matrix`) to
allow subclasses of `Model` to define how to compute their
separability matrix. [#12900]
astropy.stats
* Fixed a bug in which running
`kuiper_false_positive_probability(D,N)` on distributions with
many data points could produce NaN values for the false
positive probability of the Kuiper statistic. [#12896]
astropy.wcs
* Fixed a bug due to which `naxis`, `pixel_shape`, and
`pixel_bounds` attributes of `astropy.wcs.WCS` were not
restored when an `astropy.wcs.WCS` object was unpickled. This
fix also eliminates `FITSFixedWarning` warning issued during
unpiclikng of the WCS objects related to the number of axes.
This fix also eliminates errors when unpickling WCS objects
originally created using non-default values for `key`,
`colsel`, and `keysel` parameters. [#12844]
* Fri Jan 28 2022 Ben Greiner <code@bnavigator.de>
- Update to 5.0.1
astropy.coordinates
* Trying to create an instance of astropy.coordinates.Distance by
providing both z and parallax now raises the expected
ValueError. [#12531]
* Fixed a bug where changing the wrap angle of the longitude
component of a representation could raise a warning or error in
certain situations. [#12556]
* astropy.coordinates.Distance constructor no longer ignores the
unit keyword when parallax is provided. [#12569]
astropy.cosmology
* astropy.cosmology.utils.aszarr can now convert Column objects.
[#12525]
* Reading a cosmology from an ECSV will load redshift and Hubble
parameter units from the cosmology units module. [#12636]
astropy.io.fits
* Fix formatting issue in _dump_coldefs and add tests for
tabledump and tableload convenience functions. [#12526]
astropy.io.misc
* YAML can now also represent quantities and arrays with
structured dtype, as well as structured scalars based on
np.void. [#12509]
astropy.modeling
* Fixes error when fitting multiplication or division based
compound models where the sub-models have different output
units. [#12475]
* Bugfix for incorrectly initialized and filled parameters data
for Spline1D model. [#12523]
* Bugfix for keyerror thrown by Model.input_units_equivalencies
when used on fix_inputs models which have no set unit
equivalencies. [#12597]
astropy.table
* astropy.table.Table.keep_columns() and
astropy.table.Table.remove_columns() now work with generators
of column names. [#12529]
* Avoid duplicate storage of info in serialized columns if the
column used to serialize already can hold that information.
[#12607] astropy.timeseries
* Fixed edge case bugs which emerged when using
aggregate_downsample with custom bins. [#12527]
astropy.units
* Structured units can be serialized to/from yaml. [#12492]
* Fix bad typing problems by removing interaction with
NDArray.__class_getitem__. [#12511]
* Ensure that Quantity.to_string(format='latex') properly
typesets exponents also when
u.quantity.conf.latex_array_threshold = -1 (i.e., when the
threshold is taken from numpy). [#12573]
* Structured units can now be copied with copy.copy and
copy.deepcopy and also pickled and unpicked also for protocol
>= 2. This does not work for big-endian architecture with older
numpy<1.21.1. [#12583]
astropy.utils
* Ensure that a Masked instance can be used to initialize (or
viewed as) a numpy.ma.Maskedarray. [#12482]
* Ensure Masked also works with numpy >=1.22, which has a keyword
argument name change for np.quantile. [#12511]
* astropy.utils.iers.LeapSeconds.auto_open() no longer emits
unnecessary warnings when astropy.utils.iers.conf.auto_max_age
is set to None. [#12713]
* Tue Dec 28 2021 Ben Greiner <code@bnavigator.de>
- Skip flaky test_color_print3
* Tue Dec 28 2021 Ben Greiner <code@bnavigator.de>
- Update to version 5.0
* https://docs.astropy.org/en/stable/whatsnew/5.0.html
* Astropy 5.0 is a major release that adds significant new
functionality since the 4.3.x series of releases. In addition,
it is a long-term support release (LTS) which will be supported
with bug fixes for two years. In particular, this release
includes:
* Support for reading, writing, and converting Cosmology
* Cosmology units module
* New Models
* Added support for dask arrays in tables
* Added support for registering array-like objects as mixin
columns
* Support for reading and writing tables to Parquet format
* Support for reading and writing tables to MRT format
* Support for masked quantity columns, including masked FITS
columns with units
* Converting SkyCoord to QTable
* New Unified I/O architecture
* In addition to these major changes, Astropy v5.0 includes a
large number of smaller improvements and bug fixes, which
are described in the Full Changelog.
https://docs.astropy.org/en/stable/changelog.html#changelog
- Drop patches fixed upstream
* astropy-pr12006-cfitsio4.patch
* astropy-pr12159-py310.patch
* Mon Dec 27 2021 Ben Greiner <code@bnavigator.de>
- Add astropy-pr12159-py310.patch -- gh#astropy/astropy#12159
* Thu Oct 28 2021 Ben Greiner <code@bnavigator.de>
- Skip test_no_numpy_warnings[contours] due to wrong MPL version
check -- gh#astropy/astropy#12050
* Fri Aug 27 2021 Ben Greiner <code@bnavigator.de>
- Suppress hypothesis health check for slow OBS episodes
* Wed Aug 18 2021 Ben Greiner <code@bnavigator.de>
- Update to version 4.3.1
Bug Fixes
astropy.io.fits
* In fits.io.getdata do not fall back to first non-primary
extension when user explicitly specifies an extension. [#11860]
* Ensure multidimensional masked columns round-trip properly to
FITS. [#11911]
* Ensure masked times round-trip to FITS, even if
multi-dimensional. [#11913]
* Raise ValueError if an np.float32 NaN/Inf value is assigned to
a header keyword. [#11922]
astropy.modeling
* Fixed bug in fix_inputs handling of bounding boxes. [#11908]
astropy.table
* Fix an error when converting to pandas any Table subclass that
automatically adds a table index when the table is created. An
example is a binned TimeSeries table. [#12018]
astropy.units
* Ensure that unpickling quantities and units in new sessions
does not change hashes and thus cause problems with (de)
composition such as getting different answers from the .si
attribute. [#11879]
* Fixed cannot import name imperial from astropy.units
namespace. [#11977]
astropy.utils
* Ensure any .info on Masked instances is propagated correctly
when viewing or slicing. As a consequence, MaskedQuantity can
now be correctly written to, e.g., ECSV format with
serialize_method='data_mask'. [#11910]
* Thu Aug 05 2021 Ben Greiner <code@bnavigator.de>
- Add astropy-pr12006-cfitsio4.patch for cfitsio 4
gh#astropy/astropy#12006
- Revert the use of bundled cfitsio for non x86 architectures.
Those just had cfitsio earlier in the repositories than x86.
* Thu Aug 05 2021 Ben Greiner <code@bnavigator.de>
- Update to version 4.3.post1
Astropy 4.3 is a major release that adds significant new
functionality since the 4.2.x series of releases.
* Transformations to AltAz are now much more precise (and faster)
* Improvements in making Astropy thread-safe
* Performance improvements to sigma clipping
* Changes in the Time and IERS leap second handling
* Support for multidimensional and object columns in ECSV
* Support for reading and writing tables to QDP format
* Append table to existing FITS file
* General masked class for Quantity and other ndarray subclasses
* Configuration file improvements
* Support for different solvers and bracket option in z_at_value
* Full changelog:
https://docs.astropy.org/en/stable/changelog.html
- Drop patch and files merged upstream:
* astropy-pr11260+pr11549-wcs76.patch
* dss.14.29.56-62.41.05.fits.gz
* tab-time-last-axis.fits
- Use bundled cfitsio for s390x, Power and ARM
- Increase Hypothesis test deadline to 5s
* Sun Jul 04 2021 Ben Greiner <code@bnavigator.de>
- Replace astropy-pr11260-wcsfailures.patch with
astropy-pr11260+pr11549-wcs76.patch
* fixes test failures because of the recent Tumbleweed update to
wcslib 7.6
* include binary test file tab-time-last-axis.fits from
gh#astropy/astropy#11549, which does not fit into the patchfile
* Sat Apr 17 2021 Ben Greiner <code@bnavigator.de>
- Fix python_expand for test call
* Thu Apr 08 2021 Ben Greiner <code@bnavigator.de>
- Update to version 4.2.1
astropy.cosmology
* Fixed an issue where specializations of the comoving distance
calculation for certain cosmologies could not handle redshift
arrays. [#10980]
astropy.io.fits
* Fix bug where manual fixes to invalid header cards were not
preserved when saving a FITS file. [#11108]
astropy.io.votable
* NumericArray converter now properly broadcasts scalar mask to
array. [#11157]
astropy.table
* Fix bug when initializing a Table subclass that uses
TableAttribute's. If the data were an instance of the table
then attributes provided in the table initialization call
could be ignored. [#11217]
astropy.time
* Change epoch of TimeUnixTAI ("unix_tai") from
1970-01-01T00:00:00 UTC to 1970-01-01T00:00:00 TAI to match
the intended and documented behaviour. This essentially
changes the resulting times by 8.000082 seconds, the initial
offset between TAI and UTC. [#11249]
astropy.units
* Fixed a bug with the quantity_input decorator where allowing
dimensionless inputs for an argument inadvertently disabled
any checking of compatible units for that argument. [#11283]
astropy.utils
* Fix a bug so that np.shape, np.ndim and np.size again work on
classes that use ShapedLikeNDArray, like representations,
frames, sky coordinates, and times. [#11133]
astropy.wcs
* Fix error when a user defined proj_point parameter is passed
to fit_wcs_from_points. [#11139]
* Mon Mar 08 2021 Ben Greiner <code@bnavigator.de>
- Fix test failures with updated wcslib -- gh#astropy/astropy#11260
* Add astropy-pr11260-wcsfailures.patch
* Add dss.14.29.56-62.41.05.fits.gz
* Fri Jan 15 2021 Benjamin Greiner <code@bnavigator.de>
- Make sure that the python >= 3.7 requirement is checked on
build time and let rpm do the rest.
- Use bundled libraries on Leap 15.X
* Fri Jan 01 2021 Benjamin Greiner <code@bnavigator.de>
- Increase the hypothesis test deadline
* Tue Dec 08 2020 Benjamin Greiner <code@bnavigator.de>
- OBS thinks the test flavor creates a build-cycle. Reintroduce
the pseudo package suffix.
* Sat Nov 28 2020 Benjamin Greiner <code@bnavigator.de>
- Update to Version 4.2
Astropy 4.2 is a major release that adds new funcionality since
the 4.1 release.
In particular, this release includes:
* Planck 2018 is accepted and now the default cosmology
* Time performance improvements
* Removed ERFA module
In addition to these major changes, Astropy v4.2 includes smaller
improvements and bug fixes and significant cleanup, which are
described in the Full Changelog. By the numbers:
* 183 issues have been closed since v4.1
* 105 pull requests have been merged since v4.1
* 63 distinct people have contributed code
- Bump requirements versions
- Drop astropy-pr10329-unbundle-erfa_4.1.patch merged upstream
* Thu Oct 22 2020 Benjamin Greiner <code@bnavigator.de>
- Update to 4.1
Astropy 4.1 is a major release that contains bug fixes and new
features since the 4.0.x series of releases. In particular, this
release includes:
* A new SpectralCoord class for representing and transforming
spectral quantities
* Support for writing Dask arrays to FITS files
* Added True Equator Mean Equinox (TEME) frame for satellite two-
line ephemeris data
* Support for in-place setting of array-valued SkyCoord and frame
objects
* Change in the definition of equality comparison for coordinate
classes
* Support use of SkyCoord in table vstack, dstack, and insert_row
* Support for table cross-match join with SkyCoord or N-d columns
* Support for custom attributes in Table subclasses
* Added a new Time subformat unix_tai
* Added support for the -TAB convention in FITS WCS
* Support for replacing submodels in CompoundModel
* Support for units on otherwise unitless models via the
Model.coerce_units method.
* Support for ASDF serialization of models
In addition to these major changes, Astropy v4.0 includes a large
number of smaller improvements and bug fixes, which are described
in the Full Changelog. By the numbers:
* 381 issues have been closed since v4.0
* 511 pull requests have been merged since v4.0
* 66 distinct people have contributed code to this release, 23 of
which are first time contributors to Astropy
- Drop astropy-pr10545-remove-newline-3d_cd_hdr.patch
* merged upstream
* gh#astropy/astropy#10545
- Add astropy-pr10329-unbundle-erfa_4.1.patch
* Remove bundled _erfa but use system package pyerfa instead
* gh#astropy/astropy#10329
- enable optional pytest-xdist
* Thu Oct 15 2020 Benjamin Greiner <code@bnavigator.de>
- Update to 4.0.3
* astropy.table
Fixed a small bug where initializing an empty `Column`
with a structured dtype with a length and a shape
failed to give the requested dtype. [#10819]
* Fixed installation of the source distribution with
pip<19. [#10837, #10852]
* Sat Oct 10 2020 Benjamin Greiner <code@bnavigator.de>
- Update to 4.0.2
New Features
* astropy.utils
astropy.utils.data.download_file now supports FTPS/FTP over
TLS. [#9964]
astropy.utils.data now uses a lock-free mechanism for caching.
This new mechanism uses a new cache layout and so ignores
caches created using earlier mechanisms (which were causing
lockups on clusters). The two cache formats can coexist but do
not share any files. [#10437, #10683]
astropy.utils.data now ignores the config item
astropy.utils.data.conf.download_cache_lock_attempts since no
locking is done. [#10437, #10683]
astropy.utils.data.download_file and related functions now
interpret the parameter or config file setting timeout=0 to
mean they should make no attempt to download files. [#10437,
[#10683]]
astropy.utils.import_file_to_cache now accepts a keyword-only
argument replace, defaulting to True, to determine whether it
should replace existing files in the cache, in a way as close
to atomic as possible. [#10437, #10683]
astropy.utils.data.download_file and related functions now
treat http://example.com and http://example.com/ as equivalent.
[#10631]
* astropy.wcs
The new auxiliary WCS parameters added in WCSLIB 7.1 are now
exposed as the aux attribute of Wcsprm. [#10333]
Updated bundled version of WCSLIB to v7.3. [#10433]
Bug fixes
* astropy.config
Added an extra fallback to os.expanduser('~') when trying to
find the user home directory. [#10570]
* astropy.constants
Corrected definition of parsec to 648 000 / pi AU following IAU
2015 B2 [#10569]
* astropy.convolution
Fixed a bug where a float-typed integers in the argument
x_range of astropy.convolution.utils.discretize_oversample_1D
(and the 2D version as well) fails because it uses
numpy.linspace, which requires an int. [#10696]
* astropy.coordinates
Ensure that for size-1 array SkyCoord and coordinate frames the
attributes also properly become scalars when indexed with 0.
[#10113]
Fixed a bug where SkyCoord.separation() and
SkyCoord.separation_3d were not accepting a frame object.
[#10332]
Ensure that the lon values in SkyOffsetFrame are wrapped
correctly at 180 degree regardless of how the underlying data
is represented. [#10163]
Fixed an error in the obliquity of the ecliptic when
transforming to/from the *TrueEcliptic coordinate frames. The
error would primarily result in an inaccuracy in the ecliptic
latitude on the order of arcseconds. [#10129]
Fixed an error in the computation of the location of solar
system bodies where the Earth location of the observer was
ignored during the correction for light travel time. [#10292]
Ensure that coordinates with proper motion that are transformed
to other coordinate frames still can be represented properly.
[#10276]
Improve the error message given when trying to get a cartesian
representation for coordinates that have both proper motion and
radial velocity, but no distance. [#10276]
Fixed an error where SkyCoord.apply_space_motion would return
incorrect results when no distance is set and proper motion is
high. [#10296]
Make the parsing of angles thread-safe so that Angle can be
used in Python multithreading. [#10556]
Fixed reporting of EarthLocation.info which previously raised
an exception. [#10592]
* astropy.io.ascii
Fixed a bug with the C fast_reader not correctly parsing
newlines when delimiter was also set to \n or \r; ensured
consistent handling of input strings without newline
characters. [#9929]
* astropy.io.fits
Fix integer formats of TFORMn=Iw columns in ASCII tables to
correctly read values exceeding int32 - setting int16, int32 or
int64 according to w. [#9901]
Fix unclosed memory-mapped FITS files in FITSDiff when
difference found. [#10159]
Fix crash when reading an invalid table file. [#10171]
Fix duplication issue when setting a keyword ending with space.
[#10482]
Fix ResourceWarning with fits.writeto and pathlib.Path object.
[#10599]
Fix repr for commentary cards and strip spaces for commentary
keywords. [#10640]
Fix compilation of cfitsio with Xcode 12. [#10772]
Fix handling of 1-dimensional arrays with a single element in
BinTableHDU [#10768]
* astropy.io.misc
Fix id URL in baseframe-1.0.0 ASDF schema. [#10223]
Write keys to ASDF only if the value is present, to account for
a change in behavior in asdf 2.8. [#10674]
* astropy.io.registry
Fix Table.(read|write).help when reader or writer has no
docstring. [#10460]
* astropy.io.votable
Fixed parsing failure of VOTable with no fields. When detecting
a non-empty table with no fields, the following warning/
exception is issued: E25 "No FIELDs are defined; DATA section
will be ignored." [#10192]
* astropy.modeling
Fixed a problem with mapping input_units and return_units of a
CompoundModel to the units of the constituent models. [#10158]
Removed hard-coded names of inputs and outputs. [#10174]
Fixed a problem where slicing a CompoundModel by name will
crash if there fix_inputs operators are present. [#10224]
Removed a limitation of fitting of data with units with
compound models without units when the expression involves
operators other than addition and subtraction. [#10415]
Fixed a problem with fitting Linear1D and Planar2D in model
sets. [#10623]
Fixed reported module name of math_functions model classes.
[#10694]
Fixed reported module name of tabular model classes. [#10709]
Do not create new math_functions models for ufuncs that are
only aliases (divide and mod). [#10697]
Fix calculation of the Moffat2D derivative with respect to
gamma. [#10784]
* astropy.stats
Fixed an API regression where SigmaClip.__call__ would convert
masked elements to nan and upcast the dtype to float64 in its
output MaskedArray when using the axis parameter along with the
defaults masked=True and copy=True. [#10610]
Fixed an issue where fully masked MaskedArray input to
sigma_clipped_stats gave incorrect results. [#10099]
Fixed an issue where sigma_clip and SigmaClip.__call__ would
return a masked array instead of a ndarray when masked=False
and the input was a full-masked MaskedArray. [#10099]
Fixed bug with funcs.poisson_conf_interval where an integer for
N with interval='kraft-burrows-nousek' would throw an error
with mpmath backend. [#10427]
Fixed bug in funcs.poisson_conf_interval with interval='kraft-
burrows-nousek' where certain combinations of source and
background count numbers led to ValueError due to the choice of
starting value for numerical optimization. [#10618]
* astropy.table
Fixed a bug when writing a table with mixin columns to FITS,
ECSV or HDF5. If one of the data attributes of the mixin (e.g.
skycoord.ra) had the same name as one of the table column names
(ra), the column (ra) would be dropped when reading the table
back. [#10222]
Fixed a bug when sorting an indexed table on the indexed column
after first sorting on another column. [#10103]
Fixed a bug in table argsort when called with reverse=True for
an indexed table. [#10103]
Fixed a performance regression introduced in #9048 when
initializing a table from Python lists. Also fixed incorrect
behavior (for data types other than float) when those lists
contain np.ma.masked elements to indicate masked data. [#10636]
Avoid modifying .meta when serializing columns to FITS.
[#10485]
Avoid crash when reading a FITS table that contains mixin info
and PyYAML is missing. [#10485]
* astropy.time
Ensure that for size-1 array Time, the location also properly
becomes a scalar when indexed with 0. [#10113]
* astropy.units
Refined test_parallax to resolve difference between 2012 and
2015 definitions. [#10569]
* astropy.utils
The default IERS server has been updated to use the FTPS server
hosted by CDDIS. [#9964]
Fixed memory allocation on 64-bit systems within xml.iterparse
[#10076]
Fix case where None could be used in a numerical computation.
[#10126]
* astropy.visualization
Fixed a bug where the ImageNormalize clip keyword was ignored
when used with calling the object on data. [#10098]
Fixed a bug where axes.xlabel/axes.ylabel where not correctly
set nor returned on an EllipticalFrame class WCSAxes plot.
[#10446]
* astropy.wcs
Handled WCS 360 -> 0 deg crossover in fit_wcs_from_points
[#10155]
Do not issue DATREF warning when MJDREF has default value.
[#10440]
Fixed a bug due to which naxis argument was ignored if header
was supplied during the initialization of a WCS object.
[#10532]
Other Changes and Additions
* Improved the speed of sorting a large Table on a single column
by a factor of around 5. [#10103]
* Ensure that astropy can be used inside Application bundles
built with pyinstaller. [#8795]
* Updated the bundled CFITSIO library to 3.49. See cextern/
cfitsio/docs/changes.txt for additional information. [#10256,
[#10665]]
* extract_array raises a ValueError if the data type of the input
array is inconsistent with the fill_value. [#10602]
- Drop merged PR patches
* astropy-pr10433-wcslib73-tests.patch gh#astropy/astropy#10433
* astropy-pr10440-wcs-datfix.patch gh#astropy/astropy#10440
- Skip test_compound_fitting_with_units gh#astropy/astropy#10675
* Fri Jul 17 2020 Benjamin Greiner <code@bnavigator.de>
- actually detect unit test failures with sys.exit(astropy.tests())
- do not fail on DeprecationWarnings
- support updated system lib wcslib 7.3 with
astropy-pr10433-wcslib73-tests.patch gh#astropy/astropy#10433
astropy-pr10440-wcs-datfix.patch gh#astropy/astropy#10440
- clean up blank lines after pytest report and prevent possible
failure of tests depending on test order
astropy-pr10545-remove-newline-3d_cd_hdr.patch
gh#astropy/astropy#10545
* Thu Jul 09 2020 Benjamin Greiner <code@bnavigator.de>
- Switch from pytest macro back to astropy.test()
This avoids compiling a second time inplace and obsoletes the
necessary deprecation warningsfilters. New deprecation warnings
from numpy 1.19 started to fail the test multibuild again.
Can now drop astropy-openSUSE-ignore-warnings.patch
- Fix update-alternatives warnings by expanding the loop early
* Sun Jul 05 2020 Benjamin Greiner <code@bnavigator.de>
- Fix conftest collection error: import local source dir for tests
- Remove ignore pytest deprecation fixed by pytest-doctestplus >= 0.6
- Ignore leap second expiry and dubious year warnings for
reproducible builds: gh#astropy/astropy#10228
astropy-openSUSE-ignore-warnings.patch
* Wed Jun 03 2020 Tomáš Chvátal <tchvatal@suse.com>
- Switch to multibuild to avoid cycle with python-asdf package
* Wed May 27 2020 Petr Gajdos <pgajdos@suse.com>
- %python3_only -> %python_alternative
* Sun Apr 19 2020 Benjamin Greiner <code@bnavigator.de>
- Update to 4.0.1.post1
* astropy.config
[gh#astropy/astropy#9975]
Fixed a bug where importing a development version of a package that
uses ``astropy`` configuration system can result in a
``~/.astropy/config/package..cfg`` file.
* astropy.coordinates
[gh#astropy/astropy#9815]
Fixed a bug where a vestigal trace of a frame class could persist in the
transformation graph even after the removal of all transformations involving
that frame class.
[gh#astropy/astropy#9815]
Fixed a bug with ``TransformGraph.remove_transform()`` when the "from" and
"to" frame classes are not explicitly specified.
[gh#astropy/astropy#9900]
Read-only longitudes can now be passed in to ``EarthLocation`` even if
they include angles outside of the range of -180 to 180 degrees.
[gh#astropy/astropy#9980]
```SkyCoord.radial_velocity_correction``` no longer raises an Exception
when space motion information is present on the SkyCoord.
* astropy.io
[gh#astropy/astropy#9866]
Fixed a bug that prevented the unified I/O infrastructure from working with
datasets that are represented by directories rather than files.
* astropy.io.ascii
[gh#astropy/astropy#9918]
Fixed a bug in the ``fast_reader`` C parsers incorrectly returning entries
of isolated positive/negative signs as ``float`` instead of ``str``.
[gh#astropy/astropy#9923]
Fixed a segmentation fault in the ``fast_reader`` C parsers when parsing an
invalid file with ``guess=True`` and the file contains inconsistent column
numbers in combination with a quoted field; e.g., ``"1 2\n 3 4 '5'"``.
[gh#astropy/astropy#9933]
Magnitude, decibel, and dex can now be stored in ``ecsv`` files.
* astropy.io.misc
[gh#astropy/astropy#9933]
Magnitude, decibel, and dex can now be stored in ``hdf5`` files.
[gh#astropy/astropy#9956, gh#astropy/astropy#9961]
Fixed serialization of polynomial models to include non default values of
domain and window values.
[gh#astropy/astropy#9950]
Fixed a bug which affected overwriting tables within ``hdf5`` files.
Overwriting an existing path with associated column meta data now also
overwrites the meta data associated with the table.
[gh#astropy/astropy#9983]
Fixed serialization of Time objects with location under time-1.0.0
ASDF schema.
* astropy.io.fits
[gh#astropy/astropy#9711, gh#astropy/astropy#9934]
Fix regression with ``GroupsHDU`` which needs to modify the header to handle
invalid headers, and fix accesing ``.data`` for empty HDU.
[gh#astropy/astropy#9711]
Fix ``fitsdiff`` when its arguments are directories that contain other
directories.
[gh#astropy/astropy#9958]
Fix writing noncontiguous data to a compressed HDU.
[gh#astropy/astropy#9978]
Added verification of ``disp`` (``TDISP``) keyword to ``fits.Column`` and
extended tests for ``TFORM`` and ``TDISP`` validation.
[gh#astropy/astropy#10012]
Fix checksum verification to process all HDUs instead of only the first one
because of the lazy loading feature.
[gh#astropy/astropy#10030]
Allow passing ``output_verify`` to ``.close`` when using the context manager.
[gh#astropy/astropy#10041]
Prevent instantiation of ``PrimaryHDU`` and ``ImageHDU`` with a scalar.
[gh#astropy/astropy#10069]
Fix column access by attribute with FITS_rec: columns with scaling or columns
from ASCII tables where not properly converted when accessed by attribute
name.
* astropy.io.misc
[gh#astropy/astropy#9933]
Magnitude, decibel, and dex can now be stored in ``hdf5`` files.
[gh#astropy/astropy#9956, gh#astropy/astropy#9961]
Fixed serialization of polynomial models to include non default values of
domain and window values.
[gh#astropy/astropy#9950]
Fixed a bug which affected overwriting tables within ``hdf5`` files.
Overwriting an existing path with associated column meta data now also
overwrites the meta data associated with the table.
[gh#astropy/astropy#9983]
Fixed serialization of Time objects with location under time-1.0.0
ASDF schema.
* astropy.modeling
[gh#astropy/astropy#9987]
Fixed a bug in setting default values of parameters of orthonormal
polynomials when constructing a model set.
* astropy.table
[gh#astropy/astropy#9839]
Fixed bug in ``Table.reverse`` for tables that contain non-mutable mixin columns
(like ``SkyCoord``) for which in-place item update is not allowed.
[gh#astropy/astropy#9933]
Tables containing Magnitude, decibel, and dex columns can now be saved to
``ecsv`` files.
[gh#astropy/astropy#10027]
Fixed bug where adding or inserting a row fails on a table with an index
defined on a column that is not the first one.
[gh#astropy/astropy#10068]
Ensured that ``table.show_in_browser`` also worked for mixin columns like
``Time`` and ``SkyCoord``.
* astropy.time
[gh#astropy/astropy#9679]
Fix inaccuracy when converting between TimeDelta and datetime.timedelta.
[gh#astropy/astropy#9812]
Fixed exception when changing ``format`` in the case when ``out_subfmt`` is
defined and is incompatible with the new format.
[gh#astropy/astropy#9812]
Fixed exceptions in ``Time.to_value()``: when supplying any ``subfmt`` argument
for string-based formats like 'iso', and for ``subfmt='long'`` for the formats
'byear', 'jyear', and 'decimalyear'.
[gh#astropy/astropy#9969]
Fixed bug where the location attribute was lost when creating a new ``Time``
object from an existing ``Time`` or list of ``Time`` objects.
[gh#astropy/astropy#10034]
Fixed a bug where an exception occurred when creating a ``Time`` object
if the ``val1`` argument was a regular double and the ``val2`` argument
was a ``longdouble``.
* astropy.timeseries
[gh#astropy/astropy#10013]
Fixed issue with reference time for the ``transit_time`` parameter returned by
the ``BoxLeastSquares`` periodogram. Now, the ``transit_time`` will be within
the range of the input data and arbitrary time offsets/zero points no longer
affect results.
* astropy.units
[gh#astropy/astropy#9948]
Fix for ``quantity_input`` annotation raising an exception on iterable
types that don't define a general ``__contains__`` for checking if ``None``
is contained (e.g. Enum as of python3.8), by instead checking for instance of
Sequence.
[gh#astropy/astropy#10066]
Fix for ``u.Quantity`` not taking into account ``ndmin`` if constructed from
another ``u.Quantity`` instance with different but convertible unit
* astropy.utils
[gh#astropy/astropy#9981]
Fixed ``deprecated_renamed_argument`` not passing in user value to
deprecated keyword when the keyword has no new name.
[gh#astropy/astropy#9985]
Fixed ``deprecated_renamed_argument`` not issuing a deprecation warning when
deprecated keyword without new name is passed in as positional argument.
[gh#astropy/astropy#10007]
Fixed detection of read-only filesystems in the caching code.
* astropy.visualization
[gh#astropy/astropy#9848]
Fixed bug from matplotlib >=3.1 where an empty Quantity array is
sent for unit conversion as an empty list.
[gh#astropy/astropy#9913]
Fix bug in ``ZScaleInterval`` to return the array minimum and
maximum when there are less then ``min_npixels`` in the input array.
[gh#astropy/astropy#8004, gh#astropy/astropy#9991]
Fix a bug in simplifying axis labels that affected non-rectangular frames.
* Increase minimum asdf version to 2.5.2.
[gh#astropy/astropy#9996, gh#astropy/astropy#9819]
* Updated wcslib to v7.2. [gh#astropy/astropy#10021]
- updated test requirements and recommends
- run pytest directly
* Tue Jan 07 2020 Sebastian Wagner <sebix+novell.com@sebix.at>
- Require erfa >= 1.7 because of https://github.com/astropy/astropy/issues/9654
* Mon Jan 06 2020 Todd R <toddrme2178@gmail.com>
- Update to 4.0
+ New Features
> astropy.config
* The config and cache directories and the name of the config file are now
customizable. This allows affiliated packages to put their configuration
files in locations other than ``CONFIG_DIR/.astropy/``.
> astropy.constants
* The version of constants can be specified via ScienceState in a way
that ``constants`` and ``units`` will be consistent.
* Default constants now use CODATA 2018 and IAU 2015 definitions.
* Constants can be pickled and unpickled.
> astropy.convolution
* Fixed a bug where having a kernel defined using unitless astropy
quantity objects would result in a crash
> astropy.coordinates
* Changed ``coordinates.solar_system_ephemeris`` to also accept local files
as input. The ephemeris can now be selected by either keyword (e.g. 'jpl',
'de430'), URL or file path.
* Added a ``cylindrical`` property to ``SkyCoord`` for shorthand access to a
``CylindricalRepresentation`` of the coordinate, as is already available
for other common representations.
* The default parameters for the ``Galactocentric`` frame are now controlled by
a ``ScienceState`` subclass, ``galactocentric_frame_defaults``. New
parameter sets will be added to this object periodically to keep up with
ever-improved measurements of the solar position and motion.
* Coordinate frame classes can now have multiple aliases by assigning a list
of aliases to the class variable ``name``. Any of the aliases can be used
for attribute-style access or as the target of ``tranform_to()`` calls.
* Passing a NaN to ``Distance`` no longer raises a warning.
> astropy.cosmology
* The pre-publication Planck 2018 cosmological parameters are included as the
``Planck2018_arXiv_v2`` object. Please note that the values are preliminary,
and when the paper is accepted a final version will be included as
``Planck18``.
> astropy.io.ascii
* Removed incorrect warnings on ``Overflow`` when reading in
``FloatType`` 0.0 with ``use_fast_converter``; synchronised
``IntType`` ``Overflow`` warning messages.
> astropy.io.misc
* Eliminate deprecated compatibility mode when writing ``Table`` metadata to
HDF5 format.
* Add support for orthogonal polynomial models to ASDF.
> astropy.io.fits
* Changed the ``fitscheck`` and ``fitsdiff`` script to use the ``argparse``
module instead of ``optparse``.
* Allow writing of ``Table`` objects with ``Time`` columns that are also table
indices to FITS files.
> astropy.io.votable
* Support VOTable version 1.4. The main addition is the new element, TIMESYS,
which allows defining of metadata for temporal coordinates much like COOSYS
defines metadata for celestial coordinates.
> astropy.logger
* Added a configuration option to specify the text encoding of the log file,
with the default behavior being the platform-preferred encoding.
> astropy.modeling
* Major rework of modeling internals. `See modeling documentation for details.
<https://docs.astropy.org/en/v4.0.x/modeling/changes_for_4.html>`_ .
* Add ``Tabular1D.inverse``.
* ``Model.rename`` was changed to add the ability to rename ``Model.inputs``
and ``Model.outputs``.
* New function ``fix_inputs`` to generate new models from others by fixing
specific inputs variable values to constants.
* ``inputs`` and ``outputs`` are now model instance attributes, and ``n_inputs``
and ``n_outputs`` are class attributes. Backwards compatible default
values of ``inputs`` and ``outputs`` are generated. ``Model.inputs`` and
``Model.outputs`` are now settable which allows renaming them on per user
case.
* Add a new model representing a sequence of rotations in 3D around an
arbitrary number of axes.
* Add many of the numpy ufunc functions as models.
* Add ``BlackBody`` model.
* Add ``Drude1D`` model.
* Added analytical King model (KingProjectedAnalytic1D).
* Added Exponential1D and Logarithmic1D models.
> astropy.nddata
* Add a way for technically invalid but unambiguous units in a fits header
to be parsed by ``CCDData``.
* ``NDData`` now only accepts WCS objects which implement either the high, or
low level APE 14 WCS API. All WCS objects are converted to a high level WCS
object, so ``NDData.wcs`` now always returns a high level APE 14 object. Not
all array slices are valid for wcs objects, so some slicing operations which
used to work may now fail.
> astropy.stats
* The ``biweight_location``, ``biweight_scale``, and
``biweight_midvariance`` functions now allow for the ``axis``
keyword to be a tuple of integers.
* Added an ``ignore_nan`` option to the ``biweight_location``,
``biweight_scale``, and ``biweight_midvariance`` functions.
* A numpy ``MaskedArray`` can now be input to the ``biweight_location``,
``biweight_scale``, and ``biweight_midvariance`` functions.
* Removed the warning related to p0 in the Bayesian blocks algorithm. The
caveat related to p0 is described in the docstring for ``Events``.
> astropy.table
* Improved the implementation of ``Table.replace_column()`` to provide
a speed-up of 5 to 10 times for wide tables. The method can now accept
any input which convertible to a column of the correct length, not just
``Column`` subclasses.
* Improved the implementation of ``Table.add_column()`` to provide a speed-up
of 2 to 10 (or more) when adding a column to tables, with increasing benefit
as the number of columns increases. The method can now accept any input
which is convertible to a column of the correct length, not just ``Column``
subclasses.
* Changed the implementation of ``Table.add_columns()`` to use the new
``Table.add_column()`` method. In most cases the performance is similar
or slightly faster to the previous implemenation.
* ``MaskedColumn.data`` will now return a plain ``MaskedArray`` rather than
the previous (unintended) ``masked_BaseColumn``.
* Added depth-wise stacking ``dstack()`` in higher level table operation.
It help will in stacking table column depth-wise.
* Added a new table equality method ``values_equal()`` which allows comparison
table values to another table, list, or value, and returns an
element-by-element equality table.
* Added new ``join_type='cartesian'`` option to the ``join`` operation.
* Allow adding a table column as a list of mixin-type objects, for instance
``t['q'] = [1 * u.m, 2 * u.m]``.
* Allow table ``join()`` using any sortable key column (e.g. Time), not
just ndarray subclasses. A column is considered sortable if there is a
``<column>.info.get_sortable_arrays()`` method that is implemented.
* Added ``Table.iterrows()`` for making row-wise iteration faster.
* Allow table to be initialized with a list of dict where the dict keys
are not the same in every row. The table column names are the set of all keys
found in the input data, and any missing key/value pairs are turned into
missing data in the table.
* Prevent unnecessary ERFA warnings when indexing by ``Time`` columns.
* Added support for sorting tables which contain non-mutable mixin columns
(like ``SkyCoord``) for which in-place item update is not allowed.
* Ensured that inserting ``np.ma.masked`` (or any other value with a mask) into
a ``MaskedColumn`` causes a masked entry to be inserted.
* Fixed a bug that caused an exception when initializing a ``MaskedColumn`` from
another ``MaskedColumn`` that has a structured dtype.
> astropy.tests
* The plugin that handles the custom header in the test output has been
moved to the ``pytest-astropy-header plugin`` package. `See the README at
<https://github.com/astropy/pytest-astropy-header>`__ for information about
using this new plugin.
> astropy.time
* Added a new time format ``ymdhms`` for representing times via year, month,
day, hour, minute, and second attributes.
* ``TimeDelta`` gained a ``to_value`` method, so that it becomes easier to
use it wherever a ``Quantity`` with units of time could be used.
* Made scalar ``Time`` and ``TimeDelta`` objects hashable based on JD, time
scale, and location attributes.
* Improved error message when bad input is used to initialize a ``Time`` or
``TimeDelta`` object and the format is specified.
* Allow numeric time formats to be initialized with numpy ``longdouble``,
``Decimal`` instances, and strings. One can select just one of these
using ``in_subfmt``. The output can be similarly set using ``out_subfmt``.
* Introduce a new ``.to_value()`` method for ``Time`` (and adjusted the
existing method for ``TimeDelta``) so that one can get values in a given
``format`` and possible ``subfmt`` (e.g., ``to_value('mjd', 'str')``.
* Prevent unecessary ERFA warnings when sorting ``Time`` objects.
> astropy.timeseries
* Addig ``epoch_phase``, ``wrap_phase`` and ``normalize_phase`` keywords to
``TimeSeries.fold()`` to control the phase of the epoch and to return
normalized phase rather than time for the folded TimeSeries.
> astropy.uncertainty
* ``Distribution`` was rewritten such that it deals better with subclasses.
As a result, Quantity distributions now behave correctly with ``to`` methods
yielding new distributions of the kind expected for the starting
distribution, and ``to_value`` yielding ``NdarrayDistribution`` instances.
* The ``pdf_*`` properties that were used to calculate statistical properties
of ``Distrubution`` instances were changed into methods. This allows one
to pass parameters such as ``ddof`` to ``pdf_std`` and ``pdf_var`` (which
generally should equal 1 instead of the default 0), and reflects that these
are fairly involved calcuations, not just "properties".
> astropy.units
* Support for unicode parsing. Currently supported superscripts are Ohm,
Ångström, and the micro-sign.
* Accept non-unit type annotations in @quantity_input.
* For numpy 1.17 and later, the new ``__array_function__`` protocol is used to
ensure that all top-level numpy functions interact properly with
``Quantity``, preserving units also in operations like ``np.concatenate``.
* Add equivalencies for surface brightness units to spectral_density.
> astropy.utils
* ``astropy.utils.data.download_file`` and
``astropy.utils.data.get_readable_fileobj`` now provides an ``http_headers``
keyword to pass in specific request headers for the download. It also now
defaults to providing ``User-Agent: Astropy`` and ``Accept: */*``
headers. The default ``User-Agent`` value can be set with a new
``astropy.data.conf.default_http_user_agent`` configuration item.
* Added a new ``astropy.utils.misc.unbroadcast`` function which can be used
to return the smallest array that can be broadcasted back to the initial
array.
* The specific IERS Earth rotation parameter table used for time and
coordinate transformations can now be set, either in a context or per
session, using ``astropy.utils.iers.earth_rotation_table``.
* Added ``export_cache`` and ``import_cache`` to permit transporting
downloaded data to machines with no Internet connection. Several new
functions are available to investigate the cache contents; e.g.,
``check_download_cache`` can be used to confirm that the persistent
cache has not become damaged.
* A new ``astropy.utils.iers.LeapSeconds`` class has been added to track
leap seconds.
> astropy.visualization
* Added a new ``time_support`` context manager/function for making it easy to
plot and format ``Time`` objects in Matplotlib.
* Added support for plotting any WCS compliant with the generalized (APE 14)
WCS API with WCSAxes.
* Improved display of information when inspecting ``WCSAxes.coords``.
* Improved error checking for the ``slices=`` argument to ``WCSAxes``.
* Added support for more solar frames in WCSAxes.
* Add support for one dimensional plots to ``WCSAxes``.
* Add a ``get_format_unit`` to ``wcsaxes.CoordinateHelper``.
* ``WCSAxes`` now, by default, sets a default label for plot axes which is the
WCS physical type (and unit) for that axis. This can be disabled using the
``coords[i].set_auto_axislabel(False)`` or by explicitly setting an axis
label.
* Fixed the display of tick labels when plotting all sky images that have a
coord_wrap less than 360.
> astropy.wcs
* Added a ``astropy.wcs.wcsapi.pixel_to_pixel`` function that can be used to
transform pixel coordinates in one dataset with a WCS to pixel coordinates
in another dataset with a different WCS. This function is designed to be
efficient when the input arrays are broadcasted views of smaller
arrays.
* Added a ``local_partial_pixel_derivatives`` function that can be used to
determine a matrix of partial derivatives of each world coordinate with
respect to each pixel coordinate.
* Updated wcslib to v6.4.
* Improved the ``SlicedLowLevelWCS`` class in ``astropy.wcs.wcsapi`` to avoid
storing chains of nested ``SlicedLowLevelWCS`` objects when applying multiple
slicing operations in turn.
* Added a ``wcs_info_str`` function to ``astropy.wcs.wcsapi`` to show a summary
of an APE-14-compliant WCS as a string.
* Added two new optional attributes to the APE 14 low-level WCS:
``pixel_axis_names`` and ``world_axis_names``.
* Updated the WCS class to now correctly take and return ``Time`` objects in
the high-level APE 14 API (e.g. ``pixel_to_world``.
* ``SlicedLowLevelWCS`` now raises ``IndexError`` rather than ``ValueError`` on
an invalid slice.
* Added ``fit_wcs_from_points`` function to ``astropy.wcs.utils``. Fits a WCS
object to set of matched detector/sky coordinates.
* Fix various bugs in ``SlicedLowLevelWCS`` when the WCS being sliced was one
dimensional.
+ API Changes
> astropy.constants
* Deprecated ``set_enabled_constants`` context manager. Use
``astropy.physical_constants`` and ``astropy.astronomical_constants``.
> astropy.convolution
* Removed the deprecated keyword argument ``interpolate_nan`` from
``convolve_fft``.
* Removed the deprecated keyword argument ``stddev`` from
``Gaussian2DKernel``.
* Deprecated and renamed ``MexicanHat1DKernel`` and ``MexicanHat2DKernel``
to ``RickerWavelet1DKernel`` and ``RickerWavelet2DKernel``.
> astropy.coordinates
* Removed the ``recommended_units`` attribute from Representations; it was
deprecated since 3.0.
* Removed the deprecated frame attribute classes, ``FrameAttribute``,
``TimeFrameAttribute``, ``QuantityFrameAttribute``,
``CartesianRepresentationFrameAttribute``; deprecated since 3.0.
* Removed ``longitude`` and ``latitude`` attributes from ``EarthLocation``;
deprecated since 2.0.
* The ``DifferentialAttribute`` for frame classes now passes through any input
to the ``allowed_classes`` if only one allowed class is specified, i.e. this
now allows passing a quantity in for frame attributes that use
``DifferentialAttribute``.
* Removed the deprecated ``galcen_ra`` and ``galcen_dec`` attributes from the
``Galactocentric`` frame.
> astropy.extern
* Remove the bundled ``six`` module.
> astropy.io.ascii
* Masked column handling has changed, see ``astropy.table`` entry below.
> astropy.io.misc
* Masked column handling has changed, see ``astropy.table`` entry below.
* Removed deprecated ``usecPickle`` kwarg from ``fnunpickle`` and
``fnpickle``.
> astropy.io.fits
* Masked column handling has changed, see ``astropy.table`` entry below.
* ``io.fits.Header`` has been made safe for subclasses for copying and slicing.
As a result of this change, the private subclass ``CompImageHeader``
now always should be passed an explicit ``image_header``.
* Removed the deprecated ``tolerance`` option in ``fitsdiff`` and
``io.fits.diff`` classes.
* Removed deprecated keyword arguments for ``CompImageHDU``:
``compressionType``, ``tileSize``, ``hcompScale``, ``hcompSmooth``,
``quantizeLevel``.
> astropy.io.votable
* Changed ``pedantic`` argument to ``verify`` and change it to have three
string-based options (``ignore``, ``warn``, and ``exception``) instead of
just being a boolean. In addition, changed default to ``ignore``, which means
that warnings will not be shown by default when loading VO tables.
> astropy.modeling
* Eliminates support for compound classes (but not compound instances!)
* Slicing compound models more restrictive.
* Shape of parameters now includes n_models as dimension.
* Parameter instances now hold values instead of models.
* Compound model parameters now share instance and value with
constituent models.
* No longer possible to assign slices of parameter values to model parameters
attribute (it is possible to replace it with a complete array).
* Many private attributes and methods have changed (see documentation).
* Deprecated ``BlackBody1D`` model and ``blackbody_nu`` and
``blackbody_lambda`` functions.
* The deprecated ``rotations.rotation_matrix_from_angle`` was removed.
* Deprecated and renamed ``MexicanHat1D`` and ``MexicanHat2D``
to ``RickerWavelet1D`` and ``RickerWavelet2D``.
* Deprecated ``modeling.utils.ExpressionTree``.
> astropy.stats
* Removed the ``iters`` keyword from sigma clipping stats functions.
* Renamed the ``a`` parameter to ``data`` in biweight stat functions.
* Renamed the ``a`` parameter to ``data`` in ``median_absolute_deviation``.
* Renamed the ``conflevel`` keyword to ``confidence_level`` in
``poisson_conf_interval``. Usage of ``conflevel`` now issues
``AstropyDeprecationWarning``.
* Renamed the ``conf`` keyword to ``confidence_level`` in
``binom_conf_interval`` and ``binned_binom_proportion``. Usage of ``conf``
now issues ``AstropyDeprecationWarning``.
* Renamed the ``conf_lvl`` keyword to ``confidence_level`` in
``jackknife_stats``. Usage of ``conf_lvl`` now issues
``AstropyDeprecationWarning``.
> astropy.table
* The handling of masked columns in the ``Table`` class has changed in a way
that may impact program behavior. Now a ``Table`` with ``masked=False``
may contain both ``Column`` and ``MaskedColumn`` objects, and adding a
masked column or row to a table no longer "upgrades" the table and columns
to masked. This means that tables with masked data which are read via
``Table.read()`` will now always have ``masked=False``, though specific
columns will be masked as needed. Two new table properties
``has_masked_columns`` and ``has_masked_values`` were added. See the
`Masking change in astropy 4.0 section within
<https://docs.astropy.org/en/v4.0.x/table/masking.html>`_ for
details.
* Table operation functions such as ``join``, ``vstack``, ``hstack``, etc now
always return a table with ``masked=False``, though the individual columns
may be masked as necessary.
* Changed implementation of ``Table.add_column()`` and ``Table.add_columns()``
methods. Now it is possible add any object(s) which can be converted or
broadcasted to a valid column for the table. ``Table.__setitem__`` now
just calls ``add_column``.
* Changed default table configuration setting ``replace_warnings`` from
``['slice']`` to ``[]``. This removes the default warning when replacing
a table column that is a slice of another column.
* Removed the non-public method
``astropy.table.np_utils.recarray_fromrecords``.
> astropy.tests
* In addition to ``DeprecationWarning``, now ``FutureWarning`` and
``ImportWarning`` would also be turned into exceptions.
* ``warnings_to_ignore_by_pyver`` option in
``enable_deprecations_as_exceptions()`` has changed. Please refer to API
documentation.
* Default settings for ``warnings_to_ignore_by_pyver`` are updated to remove
very old warnings that are no longer relevant and to add a new warning
caused by ``pytest-doctestplus``.
> astropy.time
* ``Time.get_ut1_utc`` now uses the auto-updated ``IERS_Auto`` by default,
instead of the bundled ``IERS_B`` file.
* Time formats that do not use ``val2`` now raise ValueError instead of
silently ignoring a provided value.
* Custom time formats can now accept floating-point types with extended
precision. Existing time formats raise exceptions rather than discarding
extended precision through conversion to ordinary floating-point.
* Time formats (implemented in subclasses of ``TimeFormat``) now have
their input and output routines more thoroughly validated, making it more
difficult to create damaged ``Time`` objects.
* The ``TimeDelta.to_value()`` method now can also take the ``format`` name
as its argument, in which case the value will be calculated using the
``TimeFormat`` machinery. For this case, one can also pass a ``subfmt``
argument to retrieve the value in another form than ``float``.
> astropy.timeseries
* Keyword ``midpoint_epoch`` is renamed to ``epoch_time``.
> astropy.uncertainty
* ``Distribution`` was rewritten such that it deals better with subclasses.
As a result, Quantity distributions now behave correctly with ``to`` methods
yielding new distributions of the kind expected for the starting distribution,
and ``to_value`` yielding ``NdarrayDistribution`` instances.
> astropy.units
* For consistency with ``ndarray``, scalar ``Quantity.value`` will now return
a numpy scalar rather than a python one. This should help keep track of
precision better, but may lead to unexpected results for the rare cases
where numpy scalars behave differently than python ones (e.g., taking the
square root of a negative number).
* Removed the ``magnitude_zero_points`` module, which was deprecated in
favour of ``astropy.units.photometric`` since 3.1.
* ``EquivalentUnitsList`` now has a ``_repr_html_`` method to output a HTML
table on a call to ``find_equivalent_units`` in Jupyter notebooks.
> astropy.utils
* ``download_file`` and related functions now accept a list of fallback
sources, and they are able to update the cache at the user's request.
* Allow ``astropy.utils.console.ProgressBarOrSpinner.map`` and
``.map_unordered`` to take an argument ``multiprocessing_start_method`` to
control how subprocesses are started; the different methods (``fork``,
``spawn``, and ``forkserver``) have different implications in terms of
security, efficiency, and behavioural anomalies. The option is useful in
particular for cross-platform testing because Windows supports only ``spawn``
while Linux defaults to ``fork``.
* All operations that act on the astropy download cache now take an argument
``pkgname`` that allows one to specify which package's cache to use.
* Removed deprecated ``funcsigs`` and ``futures`` from
``astropy.utils.compat``.
* Removed the deprecated ``astropy.utils.compat.numpy`` module.
* Deprecated ``InheritDocstrings`` as it is natively supported by
Sphinx 1.7 or higher.
* Deprecated ``astropy.utils.timer`` module, which has been moved to
``astroquery.utils.timer`` and will be part of ``astroquery`` 0.4.0.
* Deprecated ``astropy.utils.misc.set_locale`` function, as it is meant for
internal use only.
* The implementation of ``data_info.DataInfo`` has changed (for a considerable
performance boost). Generally, this should not affect simple subclasses, but
because the class now uses ``__slots__`` any attributes on the class have to
be explicitly given a slot.
* ``IERS`` tables now use ``nan`` to mark missing values
(rather than ``1e20``).
> astropy.visualization
* The default ``clip`` value is now ``False`` in ``ImageNormalize``.
* The default ``clip`` value is now ``False`` in ``simple_norm``.
* Infinite values are now excluded when calculating limits in
``ManualInterval`` and ``MinMaxInterval``. They were already excluded in
all other interval classes.
+ Bug Fixes
> astropy.coordinates
* The ``QuantityAttribute`` class now supports a None default value if a unit
is specified.
* When ``Representation`` classes with the same name are defined, this no
longer leads to a ``ValueError``, but instead to a warning and the removal
of both from the name registry (i.e., one either has to use the class itself
to set, e.g., ``representation_type``, or refer to the class by its fully
qualified name).
> astropy.io.fits
* Implemented skip (after warning) of header cards with reserved
keywords in ``table_to_hdu``.
* Add ``AstropyDeprecationWarning`` to ``read_table_fits`` when ``hdu=`` is
selected, but does not match single present table HDU.
> astropy.io.votable
* Ignore BINARY2 null mask bits for string values
on parsing a VOTable. In this way, the reader should never create masked
values for string types.
* Corrected a spurious warning issued for the ``value`` attribute of the
``<OPTION>`` element in VOTable, as well as a test that erroneously
treated the warning as acceptable.
> astropy.nddata
* ``Cutout2D`` will now get the WCS from its first argument if that argument
has with WCS property.
* ``overlap_slices`` will now raise a ``ValueError`` if the input
position contains any non-finite values (e.g. NaN or inf).
> astropy.stats
* Fixed a bug where ``bayesian_blocks`` returned a single edge.
* Fixed input data type validation for ``bayesian_blocks`` to work int
arrays.
> astropy.table
* Fix bug where adding a column consisting of a list of masked arrays was
dropping the masks.
* ``Quantity`` columns with custom units can now round-trip via FITS tables,
as long as the custom unit is enabled during reading (otherwise, the unit
will become an ``UnrecognizedUnit``).
* Fix bug where string values could be truncated when inserting into a
``Column`` or ``MaskedColumn``, or when adding or inserting a row containing
string values.
> astropy.time
* Fix bug when ``Time`` object is created with only masked elements.
* Fix inaccuracy when converting between TimeDelta and datetime.timedelta.
> astropy.units
* Ensure that output from test functions of and comparisons between quantities
can be stored into pre-allocated output arrays (using ``out=array``)
> astropy.utils
* For the default ``IERS_Auto`` table, which combines IERS A and B values, the
IERS nutation parameters "dX_2000A" and "dY_2000A" are now also taken from
the actual IERS B file rather than from the B values stored in the IERS A
file. Any differences should be negligible for any practical application,
but this may help exactly reproducing results.
> astropy.visualization
* Calling ``WCSAxes.set_axis_off()`` now correctly turns off drawing the Axes.
* Fix incorrect transformation behavior in ``WCSAxes.plot_coord`` and correctly
handle when input coordinates are not already in spherical representations.
* Fixed ``ImageNormalize`` so that when it is intialized without
``data`` it will still use the input ``interval`` class.
* Fixed ``ImageNormalize`` to handle input data with non-finite
values.
> astropy.wcs
* Fix incorrect value returned by
``wcsapi.HighLevelWCSWrapper.axis_correlation_matrix``.
* Fix NaN-masking of world coordinates when some but not all of the coordinates
were flagged as invalid by WCSLIB. This occurred for example with WCS with >2
dimensions where two of the dimensions were celestial coordinates and pixel
coordinates ouside of the 'sky' were converted to world coordinates -
previously all world coordinates were masked even if uncorrelated with the
celestial axes, but this is no longer the case.
* The default WCS to celestial frame mapping for world coordinate systems that
specify ``TLON`` and ``TLAT`` coordinates will now return an ITRS frame with
the representation class set to ``SphericalRepresentation``. This fixes a bug
that caused ``WCS.pixel_to_world`` to raise an error for such world
coordinate systems.
* ``FITSWCSAPIMixin`` now returns tuples not lists from ``pixel_to_world`` and
``world_to_pixel``.
+ Other Changes and Additions
* Versions of Python <3.6 are no longer supported.
* Matplotlib 2.1 and later is now required.
* Versions of Numpy <1.16 are no longer supported.
* Updated the bundled CFITSIO library to 3.470. See
``cextern/cfitsio/docs/changes.txt`` for additional information.
* The bundled ERFA was updated to version 1.7.0. This is based on
SOFA 20190722. This includes a fix to avoid precision loss for negative
JDs, and also includes additional routines to allow updates to the
leap-second table.
* The default server for the IERS data files has been updated to reflect
long-term downtime of the canonical USNO server.
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