lagan-2.0-38.fc38 RPM for x86_64

From Fedora 38 for x86_64 / l

LAGAN toolkit is a set of tools for local, global, and multiple alignment of
DNA sequences.  Please visit http://lagan.stanford.edu for publications
describing LAGAN and its components.

The 4 main parts of LAGAN are:

1. CHAOS local alignment tool
2. LAGAN pairwise global alignment tool
3. MLAGAN multiple global alignment tool.
4. Shuffle-LAGAN pairwise global alignment

Provides

• lagan
• lagan(x86-64)

Requires

• /usr/bin/perl
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.14)(64bit)
• libc.so.6(GLIBC_2.2.5)(64bit)
• libc.so.6(GLIBC_2.3)(64bit)
• libc.so.6(GLIBC_2.3.4)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libc.so.6(GLIBC_2.4)(64bit)
• libc.so.6(GLIBC_2.7)(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libgcc_s.so.1(GCC_3.3.1)(64bit)
• libm.so.6()(64bit)
• libm.so.6(GLIBC_2.29)(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• perl(:VERSION) >= 5.5.0
• perl(Cwd)
• perl(File::Basename)
• perl(File::Copy)
• perl(File::Path)
• perl(Getopt::Long)
• perl(IO::Handle)
• perl(IPC::Open2)
• perl(constant)
• perl(strict)
• perl(warnings)
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1
• rtld(GNU_HASH)

License

GPLv2

Changelog

* Thu Jan 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 2.0-38
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
* Fri Jan 13 2023 Florian Weimer <fweimer@redhat.com> - 2.0-37
  - C99 compatibility fixes (#2160661)
* Thu Jul 21 2022 Fedora Release Engineering <releng@fedoraproject.org> - 2.0-36
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
* Thu Jan 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 2.0-35
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
* Thu Jul 22 2021 Fedora Release Engineering <releng@fedoraproject.org> - 2.0-34
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
* Tue Jan 26 2021 Fedora Release Engineering <releng@fedoraproject.org> - 2.0-33
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild

Files

/usr/bin/chaos
/usr/bin/lagan
/usr/bin/mlagan
/usr/bin/prolagan
/usr/bin/slagan
/usr/lib/.build-id
/usr/lib/.build-id/1b
/usr/lib/.build-id/1b/4fae1646c82b390c7dfd770c1b4ea2fd835c37
/usr/lib/.build-id/1c
/usr/lib/.build-id/1c/ed2e563b4c87743a4207c0ce9fc08af60d6358
/usr/lib/.build-id/20
/usr/lib/.build-id/20/c643b38ad41e15740f51439cf97938295a7192
/usr/lib/.build-id/2a
/usr/lib/.build-id/2a/6688c33044aff2cb2008e5be9c5601e3872294
/usr/lib/.build-id/3d
/usr/lib/.build-id/3d/5d459cf3a7cf9a34ca1b67bbf5f76c8fe160db
/usr/lib/.build-id/45
/usr/lib/.build-id/45/b7e2eb650ff4bf7fa665da93ebee62aa8afaa9
/usr/lib/.build-id/51
/usr/lib/.build-id/51/1a22a44b1a0a59a2763981be0dcf98398bc8b3
/usr/lib/.build-id/56
/usr/lib/.build-id/56/4d465290cb959cb3c80892e6ecefb814dd7953
/usr/lib/.build-id/58
/usr/lib/.build-id/58/61842ae868917a2014d1b187729d55a8da36eb
/usr/lib/.build-id/5b
/usr/lib/.build-id/5b/b70665bf040824275f29e6857c53e530283af9
/usr/lib/.build-id/6a
/usr/lib/.build-id/6a/f4d90387ba189bbbaea370a0159668b4f2aea8
/usr/lib/.build-id/7b
/usr/lib/.build-id/7b/1e1812c53d7975feb4f66ebe0c9a042ac4f88b
/usr/lib/.build-id/7b/f87673e0f7ffbd8e4103a7126581816b8dc3f8
/usr/lib/.build-id/89
/usr/lib/.build-id/89/c35217f64bfd8f241c27aba4c58458cc54c705
/usr/lib/.build-id/8f
/usr/lib/.build-id/8f/2352a5b8f65677c15711cd2b178c48e7b53510
/usr/lib/.build-id/91
/usr/lib/.build-id/91/40133cb950a1b568c5c11759f6a3fe1f245000
/usr/lib/.build-id/91/ab3d498185931a55d4d39c0c32687065c02a5c
/usr/lib/.build-id/97
/usr/lib/.build-id/97/7325230120b959851e4e4d9842d04edec24370
/usr/lib/.build-id/a1
/usr/lib/.build-id/a1/a42c1739ed4e60e649f117b71b9cbe3887af5f
/usr/lib/.build-id/aa
/usr/lib/.build-id/aa/bebacd7bb3affb7ae9bdb93c798a78cd78f66e
/usr/lib/.build-id/ac
/usr/lib/.build-id/ac/ab5c3ad99e9c3c6786940db72231978f222b36
/usr/lib/.build-id/c9
/usr/lib/.build-id/c9/aec2ab422cb5018001201f8142d23ffa4dcf9d
/usr/lib/.build-id/d5
/usr/lib/.build-id/d5/d3bddcb81d36fb5d1177553239f7dcca9cfc28
/usr/lib64/lagan
/usr/lib64/lagan/anal_gloc.pl
/usr/lib64/lagan/anchors
/usr/lib64/lagan/blosum62.txt
/usr/lib64/lagan/blosum62s.txt
/usr/lib64/lagan/glocal
/usr/lib64/lagan/nucmatrix.txt
/usr/lib64/lagan/order
/usr/lib64/lagan/rechaos.pl
/usr/lib64/lagan/supermap.pl
/usr/lib64/lagan/test.score
/usr/lib64/lagan/utils
/usr/lib64/lagan/utils/Glue
/usr/lib64/lagan/utils/bin2bl
/usr/lib64/lagan/utils/bin2mf
/usr/lib64/lagan/utils/cextract
/usr/lib64/lagan/utils/cmerge2.pl
/usr/lib64/lagan/utils/contigorder
/usr/lib64/lagan/utils/cstat
/usr/lib64/lagan/utils/dotplot
/usr/lib64/lagan/utils/draft.pl
/usr/lib64/lagan/utils/fa2xfa
/usr/lib64/lagan/utils/getbounds
/usr/lib64/lagan/utils/getcontigpos
/usr/lib64/lagan/utils/getlength
/usr/lib64/lagan/utils/getoverlap
/usr/lib64/lagan/utils/mextract.pl
/usr/lib64/lagan/utils/mf2bin.pl
/usr/lib64/lagan/utils/mpretty.pl
/usr/lib64/lagan/utils/mproject.pl
/usr/lib64/lagan/utils/mrun.pl
/usr/lib64/lagan/utils/mrunfile.pl
/usr/lib64/lagan/utils/mrunpairs.pl
/usr/lib64/lagan/utils/mviz.pl
/usr/lib64/lagan/utils/overlay
/usr/lib64/lagan/utils/rc
/usr/lib64/lagan/utils/scorealign
/usr/lib64/lagan/utils/scorecontigs
/usr/lib64/lagan/utils/seqmerge
/usr/lib64/lagan/xmfa2mfa.pl
/usr/share/doc/lagan
/usr/share/doc/lagan/LICENSE
/usr/share/doc/lagan/README.FIRST
/usr/share/doc/lagan/README.chaos
/usr/share/doc/lagan/README.lagan
/usr/share/doc/lagan/README.mlagan
/usr/share/doc/lagan/README.shuffle
/usr/share/doc/lagan/README.tools
/usr/share/doc/lagan/sample.fasta
/usr/share/doc/lagan/sample.params

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Fabrice Bellet, Thu May 9 21:57:25 2024