fastx_toolkit-0.0.14-31.fc38 RPM for s390x

From Fedora 38 for s390x / f

The FASTX-Toolkit is a collection of command line tools for
Short-Reads FASTA/FASTQ files preprocessing.

Next-Generation sequencing machines usually produce FASTA or FASTQ
files, containing multiple short-reads sequences (possibly with
quality information).

The main processing of such FASTA/FASTQ files is mapping (aka
aligning) the sequences to reference genomes or other databases using
specialized programs. Example of such mapping programs are: Blat,
SHRiMP, LastZ, MAQ and many many others.

However, It is sometimes more productive to preprocess the FASTA/FASTQ
files before mapping the sequences to the genome - manipulating the
sequences to produce better mapping results.

The FASTX-Toolkit tools perform some of these preprocessing tasks.

Provides

• fastx_toolkit
• fastx_toolkit(s390-64)

Requires

• /usr/bin/bash
• /usr/bin/perl
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.2)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libc.so.6(GLIBC_2.4)(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libgcc_s.so.1(GCC_3.3.1)(64bit)
• libgtextutils-0.7.so.0()(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.5)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.18)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• perl(Carp)
• perl(Data::Dumper)
• perl(GD::Graph::bars)
• perl(Getopt::Long)
• perl(IO::Handle)
• perl(PerlIO::gzip)
• perl(strict)
• perl(warnings)
• perl-GDGraph
• perl-PerlIO-gzip
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1
• rtld(GNU_HASH)
• sed

License

AGPLv3+

Changelog

* Thu Jan 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-31
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
* Thu Jul 21 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-30
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
* Thu Jan 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-29
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
* Wed Jul 21 2021 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-28
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
* Tue Jan 26 2021 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-27
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild

Files

/usr/bin/fasta_clipping_histogram.pl
/usr/bin/fasta_formatter
/usr/bin/fasta_nucleotide_changer
/usr/bin/fastq_masker
/usr/bin/fastq_quality_boxplot_graph.sh
/usr/bin/fastq_quality_converter
/usr/bin/fastq_quality_filter
/usr/bin/fastq_quality_trimmer
/usr/bin/fastq_to_fasta
/usr/bin/fastx_artifacts_filter
/usr/bin/fastx_barcode_splitter.pl
/usr/bin/fastx_clipper
/usr/bin/fastx_collapser
/usr/bin/fastx_nucleotide_distribution_graph.sh
/usr/bin/fastx_nucleotide_distribution_line_graph.sh
/usr/bin/fastx_quality_stats
/usr/bin/fastx_renamer
/usr/bin/fastx_reverse_complement
/usr/bin/fastx_trimmer
/usr/bin/fastx_uncollapser
/usr/lib/.build-id
/usr/lib/.build-id/10
/usr/lib/.build-id/10/adbcbeb0490cc2dba4470a8b29a3b9e96c72b1
/usr/lib/.build-id/25
/usr/lib/.build-id/25/f818364d2ee3890e336656efae223d9166bf38
/usr/lib/.build-id/34
/usr/lib/.build-id/34/3472903be3bdf9cce5ad3f88e3c80ce2a71963
/usr/lib/.build-id/35
/usr/lib/.build-id/35/b98cfc67ee63310d8a441512216bfb21d620be
/usr/lib/.build-id/51
/usr/lib/.build-id/51/149614a2531ac55f7bf4cb42a20869cdf07947
/usr/lib/.build-id/5b
/usr/lib/.build-id/5b/8ae42d52fa7a3f1ef2a9048b3ff078f676dc18
/usr/lib/.build-id/62
/usr/lib/.build-id/62/4391eb7c366b2c2253cfff107d0e5cb506dd4b
/usr/lib/.build-id/80
/usr/lib/.build-id/80/48fec128f1a604f61d4448cb5ce099acd0f47c
/usr/lib/.build-id/99
/usr/lib/.build-id/99/c1b8112d5009d6adb9a3a8029ddf2d46574374
/usr/lib/.build-id/c1
/usr/lib/.build-id/c1/86133acb67218d3d0b70a9e49eec1efa7ded08
/usr/lib/.build-id/c2
/usr/lib/.build-id/c2/5a3baef86ebf858715a6a597721569996a323f
/usr/lib/.build-id/d8
/usr/lib/.build-id/d8/ec1ee5ea87ff05186be10dc0946f79b181f889
/usr/lib/.build-id/dd
/usr/lib/.build-id/dd/55a667ac7f0fd63f78afdde81ba05c9f3aa686
/usr/lib/.build-id/e2
/usr/lib/.build-id/e2/ddf2945e10d60b01a6f5ce5a47623ca8eeb673
/usr/lib/.build-id/e4
/usr/lib/.build-id/e4/4a73d621e6c34d93ffb4641f0935bebe0bef76
/usr/share/doc/fastx_toolkit
/usr/share/doc/fastx_toolkit/AUTHORS
/usr/share/doc/fastx_toolkit/COPYING
/usr/share/doc/fastx_toolkit/NEWS
/usr/share/doc/fastx_toolkit/README
/usr/share/doc/fastx_toolkit/THANKS

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Fabrice Bellet, Tue Apr 9 23:07:34 2024