lagan-2.0-36.fc37 RPM for x86_64

From Fedora 37 for x86_64 / l

LAGAN toolkit is a set of tools for local, global, and multiple alignment of
DNA sequences.  Please visit http://lagan.stanford.edu for publications
describing LAGAN and its components.

The 4 main parts of LAGAN are:

1. CHAOS local alignment tool
2. LAGAN pairwise global alignment tool
3. MLAGAN multiple global alignment tool.
4. Shuffle-LAGAN pairwise global alignment

Provides

• lagan
• lagan(x86-64)

Requires

• /usr/bin/perl
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.14)(64bit)
• libc.so.6(GLIBC_2.2.5)(64bit)
• libc.so.6(GLIBC_2.3)(64bit)
• libc.so.6(GLIBC_2.3.4)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libc.so.6(GLIBC_2.4)(64bit)
• libc.so.6(GLIBC_2.7)(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libgcc_s.so.1(GCC_3.3.1)(64bit)
• libm.so.6()(64bit)
• libm.so.6(GLIBC_2.29)(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• perl(:VERSION) >= 5.5.0
• perl(Cwd)
• perl(File::Basename)
• perl(File::Copy)
• perl(File::Path)
• perl(Getopt::Long)
• perl(IO::Handle)
• perl(IPC::Open2)
• perl(constant)
• perl(strict)
• perl(warnings)
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1
• rtld(GNU_HASH)

License

GPLv2

Changelog

* Thu Jul 21 2022 Fedora Release Engineering <releng@fedoraproject.org> - 2.0-36
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild
* Thu Jan 20 2022 Fedora Release Engineering <releng@fedoraproject.org> - 2.0-35
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild
* Thu Jul 22 2021 Fedora Release Engineering <releng@fedoraproject.org> - 2.0-34
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild
* Tue Jan 26 2021 Fedora Release Engineering <releng@fedoraproject.org> - 2.0-33
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild
* Tue Jul 28 2020 Fedora Release Engineering <releng@fedoraproject.org> - 2.0-32
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild

Files

/usr/bin/chaos
/usr/bin/lagan
/usr/bin/mlagan
/usr/bin/prolagan
/usr/bin/slagan
/usr/lib/.build-id
/usr/lib/.build-id/05
/usr/lib/.build-id/05/dc280c4181281547cec2dc16e75b71bb1e73e0
/usr/lib/.build-id/10
/usr/lib/.build-id/10/c61676b5d0de7295030797dd671b847267f3ba
/usr/lib/.build-id/2e
/usr/lib/.build-id/2e/dc69b95e56ceddb94de3d59c802ae60367e074
/usr/lib/.build-id/34
/usr/lib/.build-id/34/576cd8bf188851d49816d3bc16c8e4a2950f4e
/usr/lib/.build-id/35
/usr/lib/.build-id/35/bb2f2acf73e3605e3bd96d660bcc1319de1efb
/usr/lib/.build-id/53
/usr/lib/.build-id/53/a0c036fa402c73d4d2bed6ba000a5620d575e8
/usr/lib/.build-id/61
/usr/lib/.build-id/61/50a6b4eff8e323646359c108e7f4320d35523a
/usr/lib/.build-id/64
/usr/lib/.build-id/64/2fc1f52ddf30df697601950a8d53b9a13949ea
/usr/lib/.build-id/81
/usr/lib/.build-id/81/f4289c772f1acacb34a8459c1633bc9d2eee28
/usr/lib/.build-id/82
/usr/lib/.build-id/82/dff871f52f696d2d0b997617a21f641d05b110
/usr/lib/.build-id/86
/usr/lib/.build-id/86/4a1444030437a8637dc897f3b5a1341aff3662
/usr/lib/.build-id/9e
/usr/lib/.build-id/9e/afe25195f6bfbdd37f30492aa5e5ac70cf005a
/usr/lib/.build-id/aa
/usr/lib/.build-id/aa/8b9c9b171e188227ae2e6cad35aad65212efc8
/usr/lib/.build-id/b4
/usr/lib/.build-id/b4/b31ddb6482d69bebee0f893c67d03b40e4c0da
/usr/lib/.build-id/bd
/usr/lib/.build-id/bd/f301d35a7eb8337f424af6b652389cb61f40ae
/usr/lib/.build-id/be
/usr/lib/.build-id/be/641e48297102d3cd8f0da3a9aead8db788df92
/usr/lib/.build-id/c7
/usr/lib/.build-id/c7/b45f45e2f343d8c8f853b3ba68476048611546
/usr/lib/.build-id/e5
/usr/lib/.build-id/e5/00373eccecb4fb6b9c505b785cb0b9d8ba3ab7
/usr/lib/.build-id/e6
/usr/lib/.build-id/e6/3b6415d0c277f0697cff59f9ae4fb88b945aec
/usr/lib/.build-id/f2
/usr/lib/.build-id/f2/bec461f483ec1833dc691fed12b9bb84b13601
/usr/lib/.build-id/f4
/usr/lib/.build-id/f4/efef0eee42b05d88206ea37ec08eabe08dc9a5
/usr/lib/.build-id/f7
/usr/lib/.build-id/f7/e90fb212039ce710a7e56649455ddd81af1aa4
/usr/lib/.build-id/fe
/usr/lib/.build-id/fe/f75dd314ffe31fd89c5d4da4b218d67e8fa03a
/usr/lib64/lagan
/usr/lib64/lagan/anal_gloc.pl
/usr/lib64/lagan/anchors
/usr/lib64/lagan/blosum62.txt
/usr/lib64/lagan/blosum62s.txt
/usr/lib64/lagan/glocal
/usr/lib64/lagan/nucmatrix.txt
/usr/lib64/lagan/order
/usr/lib64/lagan/rechaos.pl
/usr/lib64/lagan/supermap.pl
/usr/lib64/lagan/test.score
/usr/lib64/lagan/utils
/usr/lib64/lagan/utils/Glue
/usr/lib64/lagan/utils/bin2bl
/usr/lib64/lagan/utils/bin2mf
/usr/lib64/lagan/utils/cextract
/usr/lib64/lagan/utils/cmerge2.pl
/usr/lib64/lagan/utils/contigorder
/usr/lib64/lagan/utils/cstat
/usr/lib64/lagan/utils/dotplot
/usr/lib64/lagan/utils/draft.pl
/usr/lib64/lagan/utils/fa2xfa
/usr/lib64/lagan/utils/getbounds
/usr/lib64/lagan/utils/getcontigpos
/usr/lib64/lagan/utils/getlength
/usr/lib64/lagan/utils/getoverlap
/usr/lib64/lagan/utils/mextract.pl
/usr/lib64/lagan/utils/mf2bin.pl
/usr/lib64/lagan/utils/mpretty.pl
/usr/lib64/lagan/utils/mproject.pl
/usr/lib64/lagan/utils/mrun.pl
/usr/lib64/lagan/utils/mrunfile.pl
/usr/lib64/lagan/utils/mrunpairs.pl
/usr/lib64/lagan/utils/mviz.pl
/usr/lib64/lagan/utils/overlay
/usr/lib64/lagan/utils/rc
/usr/lib64/lagan/utils/scorealign
/usr/lib64/lagan/utils/scorecontigs
/usr/lib64/lagan/utils/seqmerge
/usr/lib64/lagan/xmfa2mfa.pl
/usr/share/doc/lagan
/usr/share/doc/lagan/LICENSE
/usr/share/doc/lagan/README.FIRST
/usr/share/doc/lagan/README.chaos
/usr/share/doc/lagan/README.lagan
/usr/share/doc/lagan/README.mlagan
/usr/share/doc/lagan/README.shuffle
/usr/share/doc/lagan/README.tools
/usr/share/doc/lagan/sample.fasta
/usr/share/doc/lagan/sample.params

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Fabrice Bellet, Thu May 9 19:58:19 2024