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| Name: bionetgen | Distribution: Fedora Project |
| Version: 2.5.0 | Vendor: Fedora Project |
| Release: 5.el7 | Build date: Mon Aug 26 17:04:22 2019 |
| Group: Unspecified | Build host: buildvm-28.phx2.fedoraproject.org |
| Size: 602460 | Source RPM: bionetgen-2.5.0-5.el7.src.rpm |
| Packager: Fedora Project | |
| Url: https://github.com/RuleWorld/bionetgen | |
| Summary: Software for rule-based modeling of biochemical systems | |
BioNetGen is software for the specification and simulation of rule-based models of biochemical systems, including signal transduction, metabolic, and genetic regulatory networks. The BioNetGen language has recently been extended to include explicit representation of compartments. A review of methods for rule-based modeling is available in Science Signaling (Sci. STKE, 18 July 2006, Issue 344, p. re6). BioNetGen is presently a mixture of Perl and C++. Network generation is currently implemented in Perl, the network simulator is C++, and a new language parser is being developed with ANTLR.
GPLv3
* Wed Jul 24 2019 Fedora Release Engineering <releng@fedoraproject.org> - 2.5.0-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild * Mon Jul 01 2019 Antonio Trande <sagitterATfedoraproject.org> - 2.5.0-4 - Use devtoolset-8 on EPEL 7 * Mon Jul 01 2019 Antonio Trande <sagitterATfedoraproject.org> - 2.5.0-3 - Rebuild for sundials * Thu May 30 2019 Jitka Plesnikova <jplesnik@redhat.com> - 2.5.0-2 - Perl 5.30 rebuild * Tue May 07 2019 Antonio Trande <sagitterATfedoraproject.org> - 2.5.0-1 - Release 2.5.0 * Sat Apr 20 2019 Antonio Trande <sagitterATfedoraproject.org> - 2.4.0-5 - Ready for MPI (disabled) - Bundle Sundials * Wed Feb 13 2019 Orion Poplawski <orion@cora.nwra.com> - 2.4.0-4 - Rebuild for openmpi 3.1.3 * Thu Jan 31 2019 Fedora Release Engineering <releng@fedoraproject.org> - 2.4.0-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild * Fri Nov 09 2018 Antonio Trande <sagitterATfedoraproject.org> - 2.4.0-2 - Filtering of SBMLMultiAux module * Thu Nov 08 2018 Antonio Trande <sagitterATfedoraproject.org> - 2.4.0-1 - Release 2.4.0 - Drop obsolete patch - Rebuild on epel7 (rhbz#1647989) * Thu Jul 12 2018 Fedora Release Engineering <releng@fedoraproject.org> - 2.3.0-9 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Thu Jun 28 2018 Jitka Plesnikova <jplesnik@redhat.com> - 2.3.0-8 - Perl 5.28 rebuild * Wed Feb 07 2018 Fedora Release Engineering <releng@fedoraproject.org> - 2.3.0-7 - Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild * Wed Nov 08 2017 Antonio Trande <sagitterATfedoraproject.org> - 2.3.0-6 - Rebuild for sundials-3.0.0 * Wed Aug 02 2017 Fedora Release Engineering <releng@fedoraproject.org> - 2.3.0-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild * Wed Jul 26 2017 Fedora Release Engineering <releng@fedoraproject.org> - 2.3.0-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild * Sun Jun 04 2017 Jitka Plesnikova <jplesnik@redhat.com> - 2.3.0-3 - Perl 5.26 rebuild * Mon May 15 2017 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.3.0-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_26_27_Mass_Rebuild * Sun May 07 2017 Antonio Trande <sagitterATfedoraproject.org> - 2.3.0-1 - Update to 2.3.0 * Wed Mar 08 2017 Antonio Trande <sagitterATfedoraproject.org> - 2.2.6-7 - Rebuild for sundials-2.7.0-10 * Fri Feb 10 2017 Fedora Release Engineering <releng@fedoraproject.org> - 2.2.6-6 - Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild * Fri Nov 04 2016 Zbigniew Jędrzejewski-Szmek <zbyszek@in.waw.pl> - 2.2.6-5 - Rebuild for sundials-2.7.0-7 * Tue Oct 25 2016 Zbigniew Jędrzejewski-Szmek <zbyszek@in.waw.pl> - 2.2.6-4 - Rebuild for sundials-2.7.0-6 * Sun Oct 16 2016 Zbigniew Jędrzejewski-Szmek <zbyszek@in.waw.pl> - 2.2.6-3 - Rebuild for libsundials (#1384636) * Sun May 15 2016 Jitka Plesnikova <jplesnik@redhat.com> - 2.2.6-2 - Perl 5.24 rebuild * Thu Feb 11 2016 Zbigniew Jędrzejewski-Szmek <zbyszek@bupkis> - 2.2.6-1 - Update to latest version - Fix gcc6 compilation issue (#1306648) * Wed Feb 03 2016 Fedora Release Engineering <releng@fedoraproject.org> - 2.2.5-8 - Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild * Wed Jun 17 2015 Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.2.5-7 - Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild * Fri Jun 05 2015 Jitka Plesnikova <jplesnik@redhat.com> - 2.2.5-6 - Perl 5.22 rebuild * Sat May 02 2015 Kalev Lember <kalevlember@gmail.com> - 2.2.5-5 - Rebuilt for GCC 5 C++11 ABI change * Tue Mar 31 2015 Zbigniew Jędrzejewski-Szmek <zbyszek@in.waw.pl> - 2.2.5-4 - Rebuilt for sundials 2.6.0. * Thu Feb 26 2015 Zbigniew Jędrzejewski-Szmek <zbyszek@in.waw.pl> - 2.2.5-3 - Rebuilt for https://fedoraproject.org/wiki/Changes/GCC5 (#1195309) * Sun Nov 30 2014 Zbigniew Jędrzejewski-Szmek <zbyszek@in.waw.pl> - 2.2.5-2 - Drop dependency on compat f77, it is not needed. * Fri Nov 21 2014 Zbigniew Jędrzejewski-Szmek <zbyszek@in.waw.pl> - 2.2.5-1 - Initial packaging.
/usr/bin/run_network /usr/share/doc/bionetgen-2.5.0 /usr/share/doc/bionetgen-2.5.0/CHANGES.txt /usr/share/doc/bionetgen-2.5.0/CREDITS.txt /usr/share/doc/bionetgen-2.5.0/README.md /usr/share/doc/bionetgen-2.5.0/VERSION /usr/share/licenses/bionetgen-2.5.0 /usr/share/licenses/bionetgen-2.5.0/LICENSE
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Fabrice Bellet, Tue Jul 9 13:11:04 2024